Difference between revisions of "Talk:WBConfCall 2014.07.17-Agenda and Minutes"
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[[User:Mh6|Mh6]] ([[User talk:Mh6|talk]]) | [[User:Mh6|Mh6]] ([[User talk:Mh6|talk]]) | ||
| + | |||
| + | = Use of Evidence Hash = | ||
| + | |||
| + | *Breakdown of Evidence Hash Use | ||
| + | **Not Used? | ||
| + | ***GO_term_evidence | ||
| + | ***Laboratory_evidence | ||
| + | ***Remark | ||
| + | ***Sequence_evidence | ||
| + | **Used Rarely (for concise descriptions, could be retired if all can be covered by Paper_evidence) | ||
| + | ***Author_evidence (note Juancarlos' comment about creating WBPerson objects) | ||
| + | ***Expr_pattern_evidence | ||
| + | ***Microarray_results_evidence | ||
| + | ***RNAi_evidence | ||
| + | **Used, but perhaps differently or inconsistently? | ||
| + | ***Curator_confirmed (useful internally, but needed on the website? Different from tag Curated_by?) | ||
| + | ***Person_evidence | ||
| + | **Routinely used | ||
| + | ***Accession_evidence | ||
| + | ***CGC_data_submission (legacy, no corresponding object) | ||
| + | ***Date_last_updated | ||
| + | ***Feature_evidence | ||
| + | ***From_analysis | ||
| + | ***Inferred_automatically | ||
| + | ***Mass_spec_evidence | ||
| + | ***Paper_evidence | ||
| + | ***Protein_id_evidence | ||
| + | ***Published_as | ||
| + | ***Variation_evidence (for GO, would be retired with new model) | ||
Latest revision as of 15:41, 17 July 2014
nurf-1 naming
I am still for the b.) option of two cgc_names and two gene, as:
- it has been done like that in other species
- they are out-paralogs so the .1 and .2 nomenclature can apply
- the amount of pain that are caused by shared geneIds is not worth it
Use of Evidence Hash
- Breakdown of Evidence Hash Use
- Not Used?
- GO_term_evidence
- Laboratory_evidence
- Remark
- Sequence_evidence
- Used Rarely (for concise descriptions, could be retired if all can be covered by Paper_evidence)
- Author_evidence (note Juancarlos' comment about creating WBPerson objects)
- Expr_pattern_evidence
- Microarray_results_evidence
- RNAi_evidence
- Used, but perhaps differently or inconsistently?
- Curator_confirmed (useful internally, but needed on the website? Different from tag Curated_by?)
- Person_evidence
- Routinely used
- Accession_evidence
- CGC_data_submission (legacy, no corresponding object)
- Date_last_updated
- Feature_evidence
- From_analysis
- Inferred_automatically
- Mass_spec_evidence
- Paper_evidence
- Protein_id_evidence
- Published_as
- Variation_evidence (for GO, would be retired with new model)
- Not Used?
