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Create the page "WormBase Model:?Life stage" on this wiki! See also the search results found.

• WormBase-Caltech Weekly Calls June 2015
  * I could not find an ontology that was ready built to adopt; few genetic model organisms, of those, FB has the most useful. Other mods use controlled voca * Requested model change for WS250 with new terms.
  6 KB (982 words) - 15:33, 2 July 2015
• WormBase-Caltech Weekly Calls January 2014
  ...Karen, others are welcome. Visit the construct model requests [http://wiki.wormbase.org/index.php/WormBase_Model:Construct here] ...arned enough Catalyst to create a workable ontology browser on the caltech wormbase sandbox.
  10 KB (1,583 words) - 18:16, 5 February 2014
• WormBase Models
  = The A - Z of WormBase Models = Document created from [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup&pathrev=WS218 WS218] models.
  16 KB (2,207 words) - 23:06, 9 January 2014
• WormBase-Caltech Weekly Calls June 2014
  === WormBase Ontology Browser (WOBr) for WS244 release === * Latest GAFs added were for Life Stage and Disease
  6 KB (801 words) - 17:29, 2 July 2014
• WS233
  New release of WormBase WS233 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  17 KB (2,002 words) - 14:17, 13 September 2012
• WormBase-Caltech Weekly Calls January 2015
  Main outline [https://docs.google.com/a/wormbase.org/document/d/1l6pExlCMI88pi_-djk8jt7IzNsMDV-nIEY9Z1gBNh-A/edit here]- not [https://docs.google.com/a/wormbase.org/document/d/1mAxrqVIhxDNpkTUBmtu12sAo58pEG763tgASlzy-3JU/ here]
  10 KB (1,453 words) - 18:52, 4 February 2015
• WormBase-Caltech Weekly Calls November 2018
  * Todd working on a spell.wormbase.org site for doing worm SPELL analyses === Expression Pattern Model ===
  6 KB (906 words) - 15:34, 6 December 2018
• WormBase-Caltech Weekly Calls August 2012
  ***Anatomy with respect to life stage (e.g. life-stage-specific cells) ***Integrated interaction model, genetic interaction ontology
  12 KB (1,878 words) - 15:55, 6 September 2012
• WormBase Model:Sequence
  [[WormBase Models]] == Model ==
  12 KB (1,258 words) - 09:29, 5 October 2010
• Updating go.ace file
  *Update spelling to Descendant in ?GO_term model *Model changes - added Status and Synonym tags.
  15 KB (1,936 words) - 16:29, 29 June 2018
• WormBase-Caltech Weekly Calls September 2016
  ...uld be great to consolidate data to directly connect genes to anatomy/life stage * adding a Community_curator tag or Curator tag in the Expression model to acknowledge the community curators that annotated/will annotate the data
  9 KB (1,490 words) - 15:35, 6 October 2016
• Gene Regulation
  == Interaction Model as of WS231 == ...ed ?Physical_interaction model has also been consolidated into this larger model. Note that #Interaction_info and #Interaction_type have been deprecated.
  59 KB (8,367 words) - 22:00, 14 December 2018
• WormBase-Caltech Weekly Calls May 2014
  === WormBase Ontology Browser (WOBr) === * http://juancarlos.wormbase.org/tools/ontology_browser
  8 KB (1,234 words) - 12:36, 4 June 2014
• Gene Interaction/archive
  ...ibing an interactor entity or condition that does not fall into a standard WormBase category WBProcess ?WBProcess XREF Interaction // WormBase biological process associated with the interaction
  50 KB (5,228 words) - 15:10, 21 July 2017
• WormMine
  [http://intermine.wormbase.org/tools/wormmine/begin.do WormMine] [https://github.com/WormBase/intermine WormMine Github]
  15 KB (2,088 words) - 16:16, 15 October 2020
• RNAi/archive
  ...ing author; for a list of all labs' two-letter codes look here: http://www.wormbase.org/db/misc/laboratory?name=*;class=laboratory), date of publication (accep ...ion. This information includes Strain/Genotype, treatment conditions, life stage, dsRNA delivery method (e.g. bacterial feeding), Phenotype observed (or not
  47 KB (7,989 words) - 23:40, 1 September 2015
• VariationConciseDescriptions
  ...ercontent.com/WormBase/wormbase-pipeline/master/wspec/models.wrm variation model]<br> ...larval development, formation of the developmentally arrested dauer larval stage (diapause),
  36 KB (5,076 words) - 01:38, 2 March 2016
• WormBase-Caltech Weekly Calls July 2020
  ...could make sure their ontology file headers (WB anatomy ontology, WB life stage, etc.) conformed to obo file header specifications, then it would be easy t * Will work on GO-CAMs and build a relevant model(s)
  9 KB (1,369 words) - 22:47, 5 August 2020
• WormBase-Caltech Weekly Calls April 2014
  * Testing at juancarlos.wormbase.org (from there go to Tools > Ontology Browser) ** Add a Reactome display to WormBase?
  10 KB (1,474 words) - 15:54, 30 April 2014
• RNAi
  == RNAi Data Model == This is the ?RNAi data model as of WormBase Release WS251:
  29 KB (4,152 words) - 20:29, 30 July 2019

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