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  • [[WormBase Models]] == Model ==
    5 KB (471 words) - 16:07, 4 October 2010
  • [[WormBase Models]] == Model ==
    8 KB (853 words) - 23:50, 16 April 2014
  • * Should we provide an analysis of raw data to users to perform their own comparative analyses * David (Angeles) working on an expression data analysis pipeline
    9 KB (1,490 words) - 15:35, 6 October 2016
  • Model in place, but data not yet migrated, but will be in place with WS221. [[Browser_Support_Statement|WormBase Browser Support statement]]
    1 KB (199 words) - 20:57, 3 November 2010
  • WormBase staff can find this document in the "Documentation" directory and edit it t = About Groups at WormBase =
    5 KB (757 words) - 01:45, 2 June 2014
  • = Proposed Model changes = Link to the model changes proposed for WS236 [[WS236_Models.wrm]]
    5 KB (752 words) - 18:55, 6 December 2012
  • =WormBase Curated Data Types and Curation Methods= HMM - Hidden Markov Model
    9 KB (1,174 words) - 18:30, 29 August 2012
  • Is there a link from WormBase to Alaska, and an announcement about its function? == WormBase resources for non-coding RNA ==
    3 KB (561 words) - 18:39, 6 February 2020
  • ...ving model nematode ''Caenorhabditis elegans''. This makes it an important model of parasitic nematode biology that is commonly used for experimental studie The current assembly shown at WormBase is from August 2009 and provided by a collaboration of the Wellcome Trust S
    3 KB (493 words) - 16:03, 15 December 2011
  • * Ontology term enrichment analysis, using ontologies other than gene ontology ** Would be good to have a single central tool/resource for enrichment analysis
    10 KB (1,464 words) - 17:09, 13 August 2015
  • ...s are being dealt with or closed, except github ticket [https://github.com/WormBase/website/issues/8156| #8156] * https://github.com/WormBase/website/issues/8156 - - needs a reply from textpresso group -Valerio will t
    4 KB (709 words) - 13:27, 5 April 2021
  • *We should be able to start configuring for WormBase at that point *Gary will propose appropriate model changes (e.g. Add "silencer" and "enhancer" to method for GBrowse display)
    7 KB (1,059 words) - 15:37, 1 August 2013
  • ''This is a running list of proposed features at WormBase'' == New displays, analysis, and data integration ==
    6 KB (842 words) - 17:01, 21 October 2011
  • == 1. Model changes (Hinxton) == 1a) Variation model sign off
    7 KB (1,182 words) - 13:50, 20 April 2012
  • <pre>New release of WormBase WS117, Wormpep117 and Wormrna117 Tue Jan 20 10:22:06 GMT 2004 http://www.sanger.ac.uk/Projects/C_elegans/WORMBASE
    6 KB (695 words) - 11:17, 21 December 2011
  • ** Should have a guide for users [http://www.wormbase.org/about/Frequently_asked_questions#f--10 Here] * User needs WormBase official response.
    3 KB (423 words) - 16:35, 7 September 2017
  • * What implications does this have for the WormBase Ontology Browser? * A lot of GO protein interaction data to extract; might use ?Analysis objects to track attribution of curation
    8 KB (1,120 words) - 16:19, 5 March 2015
  • ...gff3, transcripts from gff3 has been expanded to represent all species in wormbase (besides any of the "sp" species) ...a for each Ace type has been expanded. Wiki has been updated: http://wiki.wormbase.org/index.php/WormMine#Data_contained_in_WormMine
    2 KB (361 words) - 16:32, 17 October 2013
  • * There shouldn't be model changes (that affect Caltech) for this next upload ...oogle.com/spreadsheets/d/1sS_uAjBJ2r5H90Lam62Ai0HunjwvfjnklkFNrDoNXeU/edit Analysis of current flags and numbers of entries]
    6 KB (921 words) - 16:52, 4 January 2018
  • Curators checked their model proposals in this file: WS241 pre-WS241 tagged models [[http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?revision=1.396&root=ensembl&view=markup pre-WS241]]
    6 KB (909 words) - 21:56, 21 November 2013

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