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- * User wanting to download genome assembly as well as RNA-Seq and miRNA-Seq data sets == 2019 International ''C. elegans'' Meeting ==4 KB (575 words) - 18:18, 6 December 2018
- ...oarray probes; SAGE oligonucleotides; and references from the primary ''C. elegans'' research literature. All of these are given with hypertext links allowing Most of this information is given as tabulated text. However, for cloned genes, there will also be a schematic diagram of the gene's physical organization5 KB (855 words) - 19:57, 11 August 2010
- *Cursory gene pages for Tier II and III genes *Long non-coding RNA (lncRNA) submissions4 KB (617 words) - 17:01, 19 July 2012
- *Recent e-mail regarding download of brief identification info from Batch Genes (in legacy) *'Nearby Genes' search tool in legacy2 KB (303 words) - 09:13, 5 October 2012
- ...C. elegans'', ''C. elegans'' other than Bristol, nematodes other than ''C. elegans'', or non-nematode species. | Genes studied or cloned||''C. elegans'' or other Caenorhabditis studied or newly identified in the paper.5 KB (816 words) - 20:11, 7 September 2011
- ...ormrna209.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS209.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (687 words) - 16:50, 21 December 2011
- ...ormrna208.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS208.gz - DNA sequences of all genes confirmed by EST &/or cDNA5 KB (581 words) - 16:50, 21 December 2011
- ...ormrna212.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS212.gz - DNA sequences of all genes confirmed by EST &/or cDNA5 KB (582 words) - 11:16, 21 December 2011
- ...ions are not. Currently, the only annotation extension relation in the C. elegans annotation file that solely uses RO relations is Molecule_relation. In the * Finding all 7S RNA (SRP) genes in C. elegans: https://github.com/WormBase/website/issues/64754 KB (691 words) - 17:16, 21 June 2018
- ...ormrna204.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS204.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (648 words) - 16:16, 21 December 2011
- ...ormrna203.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS203.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (662 words) - 16:50, 21 December 2011
- ...ormrna213.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS213.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (764 words) - 16:45, 21 December 2011
- ...ormrna187.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS187.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (647 words) - 16:43, 21 December 2011
- ...'s in the genome vii) confirmed_genes.WS199.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...ted_map_positions.WS199.gz - Interpolated map positions for each coding/RNA gene6 KB (661 words) - 16:51, 21 December 2011
- 1. Looking for AVB-specific promoter of C. Elegans - single cell RNA-seq data available for the cell-specific gene or reporter expression patter2 KB (303 words) - 18:23, 16 April 2020
- ...ormrna207.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS207.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (675 words) - 16:42, 21 December 2011
- ...ar Elegans group containing C. elegans, C. briggsae, C. remanei, and other elegans look-alikes. Meanwhile, the genome of C. angaria (as determined by next-gen RNA-seq scaffolding) has been published in the December 2010 issue of Genome Re3 KB (437 words) - 16:02, 15 December 2011
- ...ormrna216.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS216.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (818 words) - 11:10, 21 December 2011
- ...ormrna188.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS188.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (769 words) - 11:01, 21 December 2011
- ...ormrna107.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS107.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (659 words) - 11:17, 21 December 2011
- ...ormrna191.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS191.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (756 words) - 16:53, 21 December 2011
- ...ormrna205.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS205.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (711 words) - 16:31, 21 December 2011
- ...ormrna196.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS196.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (748 words) - 16:41, 21 December 2011
- ...ormrna210.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS210.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (721 words) - 16:46, 21 December 2011
- ...ormrna198.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS198.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (692 words) - 16:51, 21 December 2011
- ...ormrna197.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS197.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (672 words) - 16:43, 21 December 2011
- ...wormrna201.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS201.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (665 words) - 16:42, 21 December 2011
- ...ormrna211.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS211.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (766 words) - 16:38, 21 December 2011
- ...ormrna179.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS179.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (843 words) - 10:53, 21 December 2011
- ...ormrna200.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS200.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (722 words) - 16:43, 21 December 2011
- ...ormrna173.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS173.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (639 words) - 10:55, 21 December 2011
- ...ormrna206.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS206.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (796 words) - 16:46, 21 December 2011
- ...ormrna214.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS214.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (709 words) - 16:49, 21 December 2011
- ...ormrna175.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS175.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (680 words) - 10:54, 21 December 2011
- '''C. elegans''' (default checked): Postgres character name: '''celegans.''' Postgres ta '''C. elegans other than Bristol: ''' Data is present for ''C. elegans'' isolates other than Bristol, such as Hawaiian, CB4855, etc. Postgres char12 KB (1,832 words) - 18:43, 11 August 2010
- |'''Genes and Genetics''' ...blications||Perl script (abstract only), Manual curation: Author, Curator||Genes, CGC names, Sequence names, Other names (synonyms)||9 KB (1,174 words) - 18:30, 29 August 2012
- ...ormrna180.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS180.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (771 words) - 10:52, 21 December 2011
- ...ormrna171.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS171.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (652 words) - 10:55, 21 December 2011
- ...ormrna202.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS202.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (770 words) - 11:06, 21 December 2011
- ...ormrna131.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS131.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (669 words) - 11:18, 21 December 2011
- ...ormrna176.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS176.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (783 words) - 10:46, 21 December 2011
- ...ormrna174.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS174.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (938 words) - 10:54, 21 December 2011
- If your paper contains experiments on C. elegans and related nematodes, please continue with the form below.<br> ...elegans||Please '''uncheck''' if you are '''not''' reporting data for ''C. elegans''.||11 KB (1,688 words) - 11:06, 21 December 2011
- ...ormrna163.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS163.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (645 words) - 10:57, 21 December 2011
- *Maybe make a C. elegans Slim Ontology ...as to avoid the problem of mapping to many genes, and each of those mapped genes becoming an interactor in the interaction4 KB (695 words) - 15:26, 7 June 2012
- ...ormrna189.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS189.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (668 words) - 11:01, 21 December 2011
- ...ormrna192.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS192.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (763 words) - 10:43, 21 December 2011
- ...rmBase/website/issues/6213 SNPs in specific genomic regions in Hawaiian C. elegans] ...cal interactions, including protein-protein, protein-DNA, protein-RNA, RNA-RNA types4 KB (574 words) - 01:54, 2 March 2018
- ...ormrna158.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS158.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (673 words) - 11:07, 21 December 2011
- ...ormrna146.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS146.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (670 words) - 11:09, 21 December 2011
- ...ormrna135.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS135.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (689 words) - 11:19, 21 December 2011
- ...ormrna160.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS160.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (706 words) - 10:50, 21 December 2011
- ...ormrna178.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS178.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (762 words) - 10:53, 21 December 2011
- ...ormrna181.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS181.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (885 words) - 16:47, 21 December 2011
- ...chromosome sequences in this release.<br><br>Gene data set (Live C.elegans genes 29879)<br>------------------------------------------<br>Molecular_info  ...DSs that have more that one coding_transcipt being appearing as non-coding genes in the genome browser has been fixed. This was patched for WS194<br><11 KB (1,614 words) - 16:52, 21 December 2011
- ...ormrna154.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS154.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (749 words) - 11:08, 21 December 2011
- Model changes for the capture clusters of genes with correlated conservation patterns DB_info Database ?Database ?Database_field ?Text //for genes from non WB species15 KB (1,645 words) - 18:54, 23 January 2014
- ...ormrna193.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS193.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (944 words) - 16:52, 21 December 2011
- i) confirmed_genes.WS222.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS222.gz - Mappings between PCR products and overlapping Genes15 KB (1,647 words) - 10:06, 22 December 2010
- ...ormrna182.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS182.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (716 words) - 16:48, 21 December 2011
- i) confirmed_genes.WS225.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS225.gz - Mappings between PCR products and overlapping Genes16 KB (1,674 words) - 11:38, 20 April 2011
- ...ormrna142.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS142.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (720 words) - 11:09, 21 December 2011
- ...ormrna217.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS217.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (915 words) - 11:10, 21 December 2011
- ...ormrna138.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS138.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (740 words) - 11:19, 21 December 2011
- ...and organize our thoughts and proposals as to how to best organize the C. elegans corpus (or for nematodes in general), including but not limited to: * Topics commonly studied in C. elegans due to its advantages as a model system10 KB (1,279 words) - 18:20, 18 October 2013
- * New RNA-Seq processing pipeline towards Y4/Y5 of the grant? - okay, mention it * Model single-cell data, and Highlight genes, markers and reagents for that cell/type6 KB (982 words) - 16:54, 1 September 2022
- ...ormrna194.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS194.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (936 words) - 16:48, 21 December 2011
- ...ormrna170.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS170.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (820 words) - 10:51, 21 December 2011
- i) confirmed_genes.WS221.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS221.gz - Mappings between PCR products and overlapping Genes17 KB (1,758 words) - 16:47, 21 December 2011
- ...ormrna172.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS172.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (783 words) - 10:55, 21 December 2011
- ....gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS122.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (721 words) - 11:18, 21 December 2011
- i) confirmed_genes.WS224.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS224.gz - Mappings between PCR products and overlapping Genes15 KB (1,583 words) - 11:13, 21 December 2011
- i) confirmed_genes.WS218.gz - DNA sequences of all genes confirmed by overlapping Genes15 KB (1,756 words) - 11:21, 21 December 2011
- i) confirmed_genes.WS223.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS223.gz - Mappings between PCR products and overlapping Genes15 KB (1,610 words) - 11:20, 21 December 2011
- i) confirmed_genes.WS219.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS219.gz - Mappings between PCR products and overlapping Genes15 KB (1,622 words) - 11:11, 21 December 2011
- ! Genes | Apoptotic process involved in development - C. elegans NSM sister cell death11 KB (1,225 words) - 19:03, 19 March 2018
- ...ormrna112.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS112.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (735 words) - 11:17, 21 December 2011
- Orthologies to elegans genes are in GFF file, along with Tier I and II genes have orthologies to tier III proteins. This info.7 KB (1,220 words) - 15:50, 25 November 2011
- === modSeek concise descriptions for C. elegans genes === * Descriptions available for ~70% of the C. elegans genome6 KB (982 words) - 15:33, 2 July 2015
- ...ormrna190.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS190.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (913 words) - 16:46, 21 December 2011
- ...ormrna147.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS147.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (815 words) - 11:09, 21 December 2011
- ...ormrna127.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS127.gz - DNA sequences of all genes confirmed by EST &/or cDNA7 KB (872 words) - 11:18, 21 December 2011
- i) confirmed_genes.WS220.gz - DNA sequences of all genes confirmed by EST &/or cDNA ...PCR_product2gene.WS220.gz - Mappings between PCR products and overlapping Genes16 KB (1,762 words) - 11:10, 21 December 2011
- ...ormrna177.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS177.gz - DNA sequences of all genes confirmed by EST &/or cDNA9 KB (819 words) - 10:53, 21 December 2011
- * Valerio generated new files to ignore/filter-out problematic genes ...oduction to the WormBase gene page and tools such as SimpleMine, Tools for RNA seq data and enrichment analysis, gene-related data using WormBase Ontology9 KB (1,364 words) - 15:39, 7 February 2019
- ...ntify, according to our primary and secondary RNAi mapping criteria, which genes are predicted to be knocked down by each clone ** Would entail generating a bolus of mappings between RNA and Gene Targets3 KB (563 words) - 03:27, 19 March 2022
- ...de+chromatin+profiling+in+C.+elegans Genome wide chromatin profiling in C. elegans]=== ...ia+of+C.+elegans+3%27UTRs+and+their+regulatory+elements Encyclopedia of C. elegans 3' UTRs and their regulatory elements]===17 KB (2,478 words) - 14:07, 5 July 2012
- ====Location of the concise description files for C. elegans:==== 1. Orthology/Similarity to C. elegans and human <br \>14 KB (1,958 words) - 20:14, 2 January 2015
- ...ormrna117.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS117.gz - DNA sequences of all genes confirmed by EST &/or cDNA6 KB (695 words) - 11:17, 21 December 2011
- * Maybe it could be taken over by Alliance, as RNA-Seq/Microarray meta data are getting harmonized === VC2010 assembly genes ===4 KB (605 words) - 15:21, 3 March 2020
- ...ormrna169.tar.gz - latest WormRNA release containing non-coding RNA's in the genome vii) confirmed_genes.WS169.gz - DNA sequences of all genes confirmed by EST &/or cDNA8 KB (787 words) - 10:56, 21 December 2011
- === Canadian C. elegans meeting === ...ystems in cancer research (https://www.fourwav.es/view/1174/info/). The C. elegans conference will be held at the CHUM Research Center in downtown Montréal o11 KB (1,676 words) - 15:28, 2 May 2019
- ...checked)||celegans||Please uncheck if you are not reporting data for ''C. elegans''.|| ...in this paper.||||change instructions to 'Please indicate if data for ''C. elegans'' isolates other than Bristol are presented in this paper."16 KB (2,310 words) - 11:05, 21 December 2011
- ...S288.ncrna_transcripts.fa.gz - Spliced cDNA sequence for non-coding RNA transcripts ...88.intergenic_sequences.fa.gz - DNA sequence between pairs of adjacent genes16 KB (1,733 words) - 21:55, 11 May 2023
- ....WS231.ncrna_transcripts.fa.gz - Spliced cDNA sequence for non-coding RNA transcripts ...S231.intergenic_sequences.fa.gz - DNA sequence between pairs of adjacent genes16 KB (1,820 words) - 14:15, 13 September 2012
- === Single-cell RNA profiling === * Some data sets, like tiling arrays, might conclude genes that are expressed in a cell/tissue9 KB (1,490 words) - 15:35, 6 October 2016
- ...ted work at the IWM about depicting gene splicing frequencies derived from RNA-Seq data on a log-scale ...deciding which splice variant(s) is/are the most prevalent, especially for genes with many splice variants3 KB (448 words) - 16:04, 5 October 2017
- == UPR Genes & Gene Classes == === Genes Involved in Cytoplasmic UPR (Heat Shock Response) ===10 KB (1,194 words) - 16:35, 13 December 2013
- ...S284.ncrna_transcripts.fa.gz - Spliced cDNA sequence for non-coding RNA transcripts ...84.intergenic_sequences.fa.gz - DNA sequence between pairs of adjacent genes17 KB (1,841 words) - 21:54, 11 May 2023
- === WBPapers sans ''C. elegans'' data === * They don't refer to ''C. elegans'' experiments, but were used to write descriptions with characterizations i6 KB (823 words) - 19:38, 2 January 2014