Difference between revisions of "Overall performance"
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! No | ! No | ||
! No | ! No | ||
− | ! | + | ! Paper discusses genetic nature of alleles. |
|- | |- | ||
! 111309 | ! 111309 | ||
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! No | ! No | ||
! No | ! No | ||
− | ! Paper discusses molecular nature of alleles used, but not original cloning paper. | + | ! Paper discusses molecular nature of alleles used, but not original cloning/sequencing paper. |
|- | |- | ||
! 111309 | ! 111309 | ||
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! Yes | ! Yes | ||
! uaf-1 mutations | ! uaf-1 mutations | ||
+ | |- | ||
+ | ! 112009 | ||
+ | ! WBPaper00035459 | ||
+ | ! high | ||
+ | ! No | ||
+ | ! No | ||
+ | ! Discussed binding sites. | ||
+ | |- | ||
+ | ! 112009 | ||
+ | ! WBPaper00035466 | ||
+ | ! high | ||
+ | ! No | ||
+ | ! Sort of | ||
+ | ! Discussed nature of deletion allele, but did not sequence; some site-directed mutagenesis. | ||
+ | |- | ||
+ | ! 112009 | ||
+ | ! WBPaper00035468 | ||
+ | ! high | ||
+ | ! Yes | ||
+ | ! Yes | ||
+ | ! seqchange in Experimental Procedures | ||
+ | |- | ||
+ | ! 112009 | ||
+ | ! WBPaper00035477 | ||
+ | ! high | ||
+ | ! Yes | ||
+ | ! Yes | ||
+ | ! pst-1/let-462 mutations | ||
+ | |- | ||
+ | ! 112909 | ||
+ | ! WBPaper00035479 | ||
+ | ! high | ||
+ | ! No | ||
+ | ! No | ||
+ | ! Discusses nature of alleles, but no sequencing. | ||
+ | |- | ||
+ | ! | ||
+ | ! | ||
+ | ! | ||
+ | ! Precision (all confidence): 30% | ||
+ | ! Precision (all confidence): 52% | ||
+ | ! | ||
+ | |- | ||
+ | ! | ||
+ | ! | ||
+ | ! | ||
+ | ! Precision (high confidence): 44% | ||
+ | ! Precision (high confidence): 69% | ||
+ | ! | ||
+ | |- | ||
} | } | ||
|} | |} | ||
+ | |||
+ | Back to [[WormBase SVMs]] | ||
+ | |||
+ | |||
+ | [[Category:Curation]] |
Latest revision as of 18:05, 16 August 2010
}
Date | Paper - SVM Positive | Confidence Score | True Positive (strict) | True Positive (more lenient) | Comment |
---|---|---|---|---|---|
103009 | WBPaper00035315 | high | Yes | Yes | tir-1 mutations |
103009 | WBPaper00035317 | medium | No | Sort of | Review, but discusses extent of deletion mutations |
103009 | WBPaper00035320 | high | Yes | Yes | briggsae SHE-1 alleles |
103009 | WBPaper00035320.sup.1 | high | No | Sort of | This is supplemental methods that describe how they identified lesions and contained a Table about temperature-sensitive phenotypes.. |
103009 | WBPaper00035324.sup.1 | low | No | Sort of | Fig. S7 shows molecular nature of deps-1 alleles, but not sequenced in this paper. |
103009 | WBPaper00035327 | medium | No | No | Paper discussed daf-2 alleles, but did not sequence them |
103009 | WBPaper00035328 | high | No | No | Paper discussed htz-1 allele, but did not sequence it. |
103009 | WBPaper00035405 | high | Yes | Yes | cwn-2 mutations |
103009 | WBPaper00035405.sup.6 | low | No | Not really | Supplemental Table lists alleles, genotyping primers, and type of polymorphism. |
103009 | WBPaper00035406 | high | No | No | Paper discusses molecular nature of alleles, but did not sequence them. |
103009 | WBPaper00035406.sup.1 | low | No | No | Discussed a number of deletion constructs. |
103009 | WBPaper00035407 | high | No | No | Paper discusses genetic nature of alleles. |
111309 | WBPaper00035423 | high | Yes | Yes | unc-82 mutations |
111309 | WBPaper00035427 | high | No | No | Lots of site-directed mutagenesis, discussion of mutations. |
111309 | WBPaper00035430 | high | No | No | Paper discusses molecular nature of alleles used, but not original cloning/sequencing paper. |
111309 | WBPaper00035439 | high | Yes | Yes | uaf-1 mutations |
112009 | WBPaper00035459 | high | No | No | Discussed binding sites. |
112009 | WBPaper00035466 | high | No | Sort of | Discussed nature of deletion allele, but did not sequence; some site-directed mutagenesis. |
112009 | WBPaper00035468 | high | Yes | Yes | seqchange in Experimental Procedures |
112009 | WBPaper00035477 | high | Yes | Yes | pst-1/let-462 mutations |
112909 | WBPaper00035479 | high | No | No | Discusses nature of alleles, but no sequencing. |
Precision (all confidence): 30% | Precision (all confidence): 52% | ||||
Precision (high confidence): 44% | Precision (high confidence): 69% |
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