Difference between revisions of "Issues-7/23/2013"
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− | = Progress on | + | = Progress on tasks to resolve before WS239 = |
− | == Test suite expansion == | + | == JB: Test suite expansion == |
+ | * GBrowse tests | ||
+ | ** goes through config - dl image for each track/species | ||
+ | ** need to benchmark - could be slow | ||
+ | * Jenkins | ||
+ | ** continuous integration - tests run whenever we push to staging | ||
+ | ** need to test api tests | ||
+ | ** add emails - yes | ||
− | == Outstanding GBrowse Issues == | + | Write tests! |
+ | [http://wiki.wormbase.org/index.php/Unit_Testing Unit Testing] | ||
+ | |||
+ | == JB: Outstanding GBrowse Issues == | ||
+ | * 4 are 'Under testing' | ||
+ | [https://github.com/WormBase/website/issues/1356 1356] | ||
+ | [https://github.com/WormBase/website/issues/1410 1410] | ||
+ | [https://github.com/WormBase/website/issues/1503 1503] | ||
+ | [https://github.com/WormBase/website/issues/1529 1529] | ||
+ | |||
+ | * Bug report: missing bp? [https://github.com/WormBase/website/issues/1517 1517] [https://github.com/WormBase/website/issues/1518 1518] | ||
+ | ** will look at this after testing | ||
+ | |||
+ | For 239: | ||
+ | * Test GFF3 and update species still using Bio::DB::GFF to Bio::DB::SeqFeature::Store [https://github.com/WormBase/website/issues/910 910] | ||
+ | * Standardize GBrowse config [https://github.com/WormBase/website/issues/909 909] | ||
+ | ** is there still work for this? - FOR 239 | ||
== JD: July Issues == | == JD: July Issues == | ||
− | [https://github.com/WormBase/website/issues/337 | + | For review: |
+ | * Process pages [https://github.com/WormBase/website/issues/337 337] - July 18 | ||
+ | * Wiki Pathway [https://github.com/WormBase/website/issues/1415 1415] [https://github.com/WormBase/website/issues/1525 1525] - July 18 | ||
+ | * Predicted exon sturcture [https://github.com/WormBase/website/issues/942 942] - July 23 | ||
+ | |||
+ | In progress: | ||
+ | * Lineage browsing [https://github.com/WormBase/website/issues/741 741] - July 25 | ||
+ | ** http://wiki.wormbase.org/index.php/Creating_a_tool | ||
+ | |||
+ | Cytoscape | ||
+ | * upgrade to js version | ||
− | + | = Triage new issues = | |
+ | * Download widget URLs wrong [https://github.com/WormBase/website/issues/1586 1586] - JB | ||
+ | * Transgene table reporter column wrong [https://github.com/WormBase/website/issues/1585 1585] - JB | ||
+ | * 500 server error dl motifs [https://github.com/WormBase/website/issues/1583 1583] - JD | ||
+ | * Disease page - genes_by_biology missing [https://github.com/WormBase/website/issues/1472 1472] - JD | ||
+ | * wrong paper associations [https://github.com/WormBase/website/issues/1049 1049] -AC | ||
+ | * save table bug [https://github.com/WormBase/website/issues/1484 1484] - JB | ||
+ | * Bristol hard-coded [https://github.com/WormBase/website/issues/1308 1308] - AC | ||
+ | * 500 error widget - molecular details [https://github.com/WormBase/website/issues/1272 1272] - JD | ||
− | |||
− | [https://github.com/WormBase/website/issues/ | + | Not urgent (but should be done before WS239): |
+ | * Blast - e value sorting [https://github.com/WormBase/website/issues/1588 1588] - JB | ||
+ | * Consecutive questions help tab [https://github.com/WormBase/website/issues/1582 1582] - AC | ||
+ | * Feature request: Features connected to Transcripts [https://github.com/WormBase/website/issues/1567 1567] - JD | ||
+ | * New table in associations widget - anatomy page [https://github.com/WormBase/website/issues/1549 1549] - AC | ||
+ | * start not found/end not found for CDSes [https://github.com/WormBase/website/issues/1506 1506] - AC |
Latest revision as of 18:10, 23 July 2013
All meetings: WebDev Issues Meetings
Tuesday July 16th, 10:30am 5th floor kitchen
Contents
Progress on tasks to resolve before WS239
JB: Test suite expansion
- GBrowse tests
- goes through config - dl image for each track/species
- need to benchmark - could be slow
- Jenkins
- continuous integration - tests run whenever we push to staging
- need to test api tests
- add emails - yes
Write tests! Unit Testing
JB: Outstanding GBrowse Issues
- 4 are 'Under testing'
1356 1410 1503 1529
For 239:
- Test GFF3 and update species still using Bio::DB::GFF to Bio::DB::SeqFeature::Store 910
- Standardize GBrowse config 909
- is there still work for this? - FOR 239
JD: July Issues
For review:
In progress:
- Lineage browsing 741 - July 25
Cytoscape
- upgrade to js version
Triage new issues
- Download widget URLs wrong 1586 - JB
- Transgene table reporter column wrong 1585 - JB
- 500 server error dl motifs 1583 - JD
- Disease page - genes_by_biology missing 1472 - JD
- wrong paper associations 1049 -AC
- save table bug 1484 - JB
- Bristol hard-coded 1308 - AC
- 500 error widget - molecular details 1272 - JD
Not urgent (but should be done before WS239):