Caltech documentation

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Contents

  • 1 First Pass Curation
  • 2 Datatype curation
  • 3 Caltech Weekly meetings
  • 4 Software/Tool Development and Technical Issues

First Pass Curation

How to FirstPass

Datatype curation

  1. Paper Pipeline
  2. Concise Descriptions
  3. Gene Ontology
  4. Gene Regulation
  5. Phenotypes
  6. Process Pages

Phenotype2GO Mappings

I. Phenote+ Phenotype Curation

  1. Installing Phenote
  2. Phenote Fields for Variation-Phenotype
  3. Phenote .obo files
  4. Phenote .ace citace upload
  5. Phenote quirks and bugs/fixes to request
  6. Postgres Queries for the Variation-Phenotype Postgres table

II. Phenotype Ontology Changes by WS

  1. WS193
  2. WS194

III. Processing NBP alleles

Caltech Weekly meetings

WormBase-Caltech Weekly Calls

Software/Tool Development and Technical Issues

Phenote cgi wish list

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