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Create the page "GO term" on this wiki! See also the search results found.

• WormBase-Caltech Weekly Calls August 2013
  *GO Term [http://mangolassi.caltech.edu/~azurebrd/cgi-bin/testing/amigo/wobr/amigo.c **Main term and children, with annotation numbers (inferred, term and descendant annotations)
  5 KB (850 words) - 15:32, 5 September 2013
• WBConfCall 2018.03.01-Agenda and Minutes
  ...get done in the next 1.5 years (detailed), but include some info of longer term plans and challenges we think we will face. This sketch needs vision of the ...l processes involved in, and cellular localization based on Gene Ontology (GO data)
  4 KB (574 words) - 01:54, 2 March 2018
• Noctua - Upload of WB Manual Annotations
  https://github.com/geneontology/go-annotation/blob/master/specs/gpad-gpi-2-0.md ...he GPAD2.0 file, but no action needed as we don't have any negation in our GO OA annotations. || n/a
  10 KB (1,456 words) - 17:43, 9 November 2023
• PMID:26412237
  ! GO Annotation |'''MF - GO:0016929 SUMO-specific protease activity
  16 KB (1,999 words) - 18:24, 28 October 2015
• WormBase-Caltech Weekly Calls July 2014
  * Based on 3 GO categories and homology * Add tissue-specific expression, and go live
  4 KB (622 words) - 16:47, 6 August 2014
• TAIR
  2) sentences from papers already curated by TAIR for GO Cellular Component 3) sentences from papers not curated by TAIR for GO Cellular Component
  14 KB (2,091 words) - 16:28, 9 December 2010
• Topic Curation
  Do you want the name of the genes for the Tier IIs, so you can add your GO-terms, etc? == UPR GO Terms & Associated Genes ==
  10 KB (1,194 words) - 16:35, 13 December 2013
• WormBase-Caltech Weekly Calls June 2015
  * Added link in WBPerson term info to Person page with publications showing ** Not sure we came to an agreement; will go ahead with trying this
  6 KB (982 words) - 15:33, 2 July 2015
• WormBase-Caltech Weekly Calls July 2012
  *Not caught up on RNAi and allele curation by end of this term *Logical extensions to GO (we will discuss next week)
  6 KB (944 words) - 16:25, 1 November 2012
• UserGuide:Neurobrowse
  ...Neurobrowse URL]. Alternatively, Neurobrowse is linked on specific Anatomy Term pages in WormBase. ..." box, at the upper left corner of the NBrowse window, and click the green GO button. For example, one queries for R2AR, a neuron in the male sensory ray
  2 KB (256 words) - 22:25, 5 August 2019
• Phenotype2GO Analysis
  ...notype2GO Annotation !! Evidence Code !! Experiment !! Reference !! Manual GO Annotation !! Evidence Code !! Comment !! Recommend Keep Phenotype2GO Annot | hsf-1 || locomotion (GO:0040011) || IMP || RNAi in rrf-3 || 6395, Simmer et al., 2003, others || No
  5 KB (825 words) - 21:25, 24 June 2013
• User Guide/SObA
  ...e follow that defined by [http://geneontology.org/docs/ontology-relations/ GO Relations] where "is a", "part of", and "regulates" are included in inferen 6. Graph display may be faceted by evidence types or ontology aspects (GO only).
  3 KB (506 words) - 21:32, 30 October 2019
• WormBase Model:Picture
  ''Cellular_component'' -- For linking to a GO term
  3 KB (320 words) - 10:55, 10 December 2010
• Topic pages
  A general summary of the process term. Can be extracted from WormBook if possible. * Mined from GO
  20 KB (3,088 words) - 19:17, 13 August 2020
• WormBase-Caltech Weekly Calls March 2014
  * Still discussing how to handle plasmids/vectors, whether they should go in the ?Clone class (there is precedence) * We will go ahead with considering including all plasmids and vectors (e.g. AddGene & F
  8 KB (1,218 words) - 17:46, 2 April 2014
• Curation Scenarios for new GO Model - GPAD and .ace Representations
  =Different Types of GO Annotations= GO_term "GO:0007191" "IDA" Paper_evidence "WBPaper00006389"
  17 KB (2,104 words) - 22:44, 17 December 2014
• WormBase-Caltech Weekly Calls December 2016
  *GO recently established link outs from PubMed to AmiGO *** gene ontology (go-slim ribbons)
  4 KB (544 words) - 16:22, 5 January 2017
• WS230 Models.wrm
  ?SO_term Term ?Text Version SOFA_ontology UNIQUE Float // Analogous to GO, the SO version number is only to be attached
  3 KB (368 words) - 10:15, 1 February 2012
• Specifications for CCC Curation from Textpresso Search Page
  ...and download the annotations in either a simple three-column format or the GO's gene_association file (GAF) format. ...ow and manually (by me) for the macromolecular interactions. For the long term, having the option to combine the SVMs with both Textpresso searches and wi
  17 KB (2,749 words) - 20:04, 21 January 2011
• CCC Form 2.0 Specifications
  ...o part of the broader plan for Textpresso-based curation pipelines and the GO's Common Annotation Framework. *Categories - gene/protein name, CCC, assay term, verb
  30 KB (4,868 words) - 14:50, 11 June 2013

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