WBConfCall 2018.02.01-Agenda and Minutes
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Revision as of 17:25, 1 February 2018 by Mh6 (talk | contribs) (→'Single-Cell' Gene Expression data)
Contents
Agenda
excused: Todd, Karen, Paolo
Open Helpdesk Tickets
Advisory Board Meeting
AGR
New Starters
- Wotjek Bazant (WormBase Parasite - Hinxton)
- April Jauhal (WormBase - Caltech)
'Single-Cell' Gene Expression data
Who deals with what?
Minutes
AGR
Interactions
- Interaction Working Group is talking about getting WormBase data into AGR
- Import from external sources, a.e. IMAP(?)
- design of page/table to display the data on AGR (v2.0)
- planning to deal with redundancy in data in some way
- similar problem to redundancy during GO curation
- can we used as weight for edges
Gene Expression
- expression XRefs
- design
- implementation
- display
- submission
- overlap between Gene Regulation / Interaction needs coordination
Disease
- add back in orthology based gene - disease association (v1.3?) with difference evidence (IEA / ISO)
- different approaches between the databases for curation/prediction
- talk about an AGR wide orthology set for predicting disease genes
Gene Descriptions
- come up with AGR wide rules for Gene Descriptions
- rewrite the WB description pipeline
- differences between WB - AGR description (custom output?)
- outreach to labs / user feedback
'Single-Cell' Gene Expression data
- coordination between CalTech and Hinxton (Gary, Raymond, Daniela), due to the large scale analysis data
- ontology terms not necessary in line with WB
