Data mining:WormMart:Example 6
1. get a list of terms that include "touch receptor neuron" and all
children terms.
<http://www.wormbase.org/biomart/martview?VIRTUALSCHEMANAME=default&FILTERS=wormbase_anatomy_term.default.filters.anatomy_term_ancestor_options."touch%20receptor%20neuron"&ATTRIBUTES=wormbase_anatomy_term.default.attributes.anatomy_term>
2. get a list of all anatomy terms
<http://www.wormbase.org/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=wormbase_anatomy_term.default.attributes.anatomy_term>
remove the 9 terms from above, save as anatomy_terms
3. get a list of all 'live' Ce genes, 2nd dataset of anatomy term "touch
receptor neuron" incl. child terms.
4. get a list of all 'live' Ce genes, 2nd dataset of anatomy terms in
anatomy_terms
5. find any gene that is in gene list 3 but not in gene list 4.
as of WS189, this results in four genes WBGene00000548 (removed in WS190), WBGene00003168, WBGene00003471, WBGene00003179