Difference between revisions of "WormBase Model:Antibody"
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///////////////////////////////////////////////////////////////////////////////////////////// | ///////////////////////////////////////////////////////////////////////////////////////////// | ||
− | ?Antibody Summary ?Text #Evidence | + | ?Antibody Summary ?Text #Evidence //Summary of the antibody |
− | Other_name Text | + | Other_name Text //for synonyms of the antibody |
− | Gene ?Gene XREF Antibody | + | Gene ?Gene XREF Antibody //Antigen gene |
− | Isolation Original_publication UNIQUE ?Paper | + | Isolation Original_publication UNIQUE ?Paper //original publication of the antibody. |
− | No_original_reference Text // | + | No_original_reference Text //for antibody without reference |
− | Person ?Person | + | Person ?Person //person who created the antibody |
− | Location ?Laboratory | + | Location ?Laboratory //Lab that created the antibody |
− | Clonality UNIQUE Polyclonal Text | + | Clonality UNIQUE Polyclonal Text //indicate if the Ab is polyclonal or monoclonal |
Monoclonal Text | Monoclonal Text | ||
− | Antigen UNIQUE Peptide Text | + | Antigen UNIQUE Peptide Text //if the Ab is created with peptide. |
− | Protein Text | + | Protein Text //if the Ab is created with protein. |
− | Other_antigen Text | + | Other_antigen Text //if the Ab is created with isolated tissue or anything else. |
− | Animal UNIQUE Rabbit | + | Animal UNIQUE Rabbit //The following tags indicate the animal that was used to generate the antiserum |
Mouse | Mouse | ||
Rat | Rat | ||
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Goat | Goat | ||
Other_animal Text | Other_animal Text | ||
− | Possible_pseudonym ?Antibody XREF Possible_pseudonym_of | + | Possible_pseudonym ?Antibody XREF Possible_pseudonym_of //this antibody may be the same as another antibody in WormBase |
− | Possible_pseudonym_of ?Antibody XREF Possible_pseudonym | + | Possible_pseudonym_of ?Antibody XREF Possible_pseudonym //this antibody may be the same as another antibody in WormBase |
− | Expr_pattern ?Expr_pattern XREF Antibody_info | + | Expr_pattern ?Expr_pattern XREF Antibody_info //This antibody is used for expression pattern analysis |
− | Gene_regulation ?Gene_regulation XREF Antibody_info | + | Gene_regulation ?Gene_regulation XREF Antibody_info //This antibody is used to study expression pattern change in mutants or under treatments |
− | Reference ?Paper XREF Antibody | + | Reference ?Paper XREF Antibody //All papers that ever refer to this antibody |
− | Remark ?Text #Evidence | + | Remark ?Text #Evidence //Other information related to the antibody. |
</pre> | </pre> |
Latest revision as of 00:53, 7 December 2010
Curator Comments/Description
Model
///////////////////////////////////////////////////////////////////////////////////////////// // // Antibody model // // Summary records the whole description extracted from paper // Other_name holds the antibody's name appeared in the paper, such as MH27 // XREF from ?Antibody to ?CDS class will be added after ?CDS is integrated // into models.wrm and gets stable. // // added by krb 031120 // // Well defined antibodies will be full populated with Isolation data. Ambigous anibodies // will be connected to what it is believed to be by the Possible_pseudonym(_of) pair of tags // No connection to CDS is required - just Gene is fine // ///////////////////////////////////////////////////////////////////////////////////////////// ?Antibody Summary ?Text #Evidence //Summary of the antibody Other_name Text //for synonyms of the antibody Gene ?Gene XREF Antibody //Antigen gene Isolation Original_publication UNIQUE ?Paper //original publication of the antibody. No_original_reference Text //for antibody without reference Person ?Person //person who created the antibody Location ?Laboratory //Lab that created the antibody Clonality UNIQUE Polyclonal Text //indicate if the Ab is polyclonal or monoclonal Monoclonal Text Antigen UNIQUE Peptide Text //if the Ab is created with peptide. Protein Text //if the Ab is created with protein. Other_antigen Text //if the Ab is created with isolated tissue or anything else. Animal UNIQUE Rabbit //The following tags indicate the animal that was used to generate the antiserum Mouse Rat Guinea_pig Chicken Goat Other_animal Text Possible_pseudonym ?Antibody XREF Possible_pseudonym_of //this antibody may be the same as another antibody in WormBase Possible_pseudonym_of ?Antibody XREF Possible_pseudonym //this antibody may be the same as another antibody in WormBase Expr_pattern ?Expr_pattern XREF Antibody_info //This antibody is used for expression pattern analysis Gene_regulation ?Gene_regulation XREF Antibody_info //This antibody is used to study expression pattern change in mutants or under treatments Reference ?Paper XREF Antibody //All papers that ever refer to this antibody Remark ?Text #Evidence //Other information related to the antibody.
Proposed Changes
Person