View source for Data mining:WormMart:Example 3

=== Download the set of all RNAi experiments that resulted in an embryonic lethal (Emb) phenotype, and in which the target genes are classified as serine/threonine kinases.  ===

*Start a new [http://caprica.caltech.edu:9002/biomart/martview WormMart] query and; 
**Select the latest database and the&nbsp;'''RNAi''' dataset<br>

*Within the <span class="Apple-style-span" style="font-weight: bold;">Filter</span>&nbsp;section; 
**Under&nbsp;'''Phenotype''', Enable the '''Limit to Phenotype Primary Name''' filter, and select the '''embryonic lethal''' option, 
*Within the lower&nbsp;'''Dataset''' section; 
**For the '''Second Dataset''' select '''GO Term''' as we will use this dataset to filter for serine/threonone kinases, 
**Within the Go Term's <span class="Apple-style-span" style="font-weight: bold;">Filter</span>&nbsp;section,&nbsp;Enable the&nbsp;'''Limit to GO Term ID(s)'''&nbsp;filter, and enter&nbsp;<span class="Apple-style-span" style="font-weight: bold;">GO:0004674 (<span class="Apple-style-span" style="font-weight: normal;">protein serine/threonine kinase activity)</span>.&nbsp;</span><span class="Apple-style-span" style="font-weight: bold;">
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*Within the RNAi <span class="Apple-style-span" style="font-weight: bold;">Attribute</span>&nbsp;section; 
**In the '''RNAi''' section, select '''RNAi WB ID''', 
**In the '''Phenotype''' section, select '''Observed Phen Info (merged)''', 
**In the '''Inhibits Gene''' section, select '''Gene Info (merged)''', 
**In the '''Experiment''' section, select '''Author (merged)''' 
*Click <span class="Apple-style-span" style="font-weight: bold;">&lt;Results&gt;</span> button&nbsp;to produce the results shown [http://caprica.caltech.edu:9002/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=wormbase_rnai.default.attributes.rnai|wormbase_rnai.default.attributes.phenotype_observed_dminfo|wormbase_rnai.default.attributes.inhibits_gene_dminfo|wormbase_rnai.default.attributes.author_dmlist|wormbase_go_term.default.attributes.go_term|wormbase_go_term.default.attributes.term&FILTERS=wormbase_rnai.default.filters.phenotype_primary_name_options.%22embryonic_lethal%22&VISIBLEPANEL=resultspanel [HERE]].

[[Data mining:WormMart:Example 2|&lt;-Last]] ... [[Data mining:WormMart|Index of Examples]]


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