WormBase Model:Microarray results

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WormBase Models

Curator Comments/Description

Model

/////////////////////////////////////////////////////////////////////
//
// ?Microarray_results class
// Contains multiple results for one microarray spot. Used for both SMD and Affymetrix chips as well as for generic chips. 
//
/////////////////////////////////////////////////////////////////////

?Microarray_results     Sequence_info UNIQUE PCR_product     UNIQUE ?PCR_product     XREF Microarray_results
                                             Oligo_set       UNIQUE ?Oligo_set       XREF Microarray_results
                        Gene          ?Gene       XREF Microarray_results #Evidence   // should be mapped during the build
                        CDS           ?CDS        XREF Microarray_results #Evidence   // should be mapped during the build
                        Transcript    ?Transcript XREF Microarray_results #Evidence   // should be mapped during the build
                        Pseudogene    ?Pseudogene XREF Microarray_results #Evidence   // should be mapped during the build
                        Microarray    ?Microarray
                        Results       ?Microarray_experiment UNIQUE #Microarray_data
                        Range         Min UNIQUE Float UNIQUE ?Microarray_experiment  // mix observed ratio or frequency in all experiments and corresponding experiment
                                      Max UNIQUE Float UNIQUE ?Microarray_experiment  // max observed ratio or frequency in all experiments and corresponding experiment 
                        Remark        ?Text   #Evidence

Proposed Changes

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Remark