Issues-10/8/2013

All meetings: WebDev Issues Meetings

Tuesday Oct 8th, 10:30am, Food court

WS239

Intermine (JW)

• all sources ran successfully
• mine build - no post-processing
  • generating dna sequences having trouble

WS240

Visualisations (JB)

• Gary feedback - will add species/strain/lifestage/etc...
  • will be included in analysis name
  • will be in Ace
• will work on sorting and display

Issues (JW)

• #1603 - Pseudogene page
• #741- lineage browser
  • delivered to Chris - waiting for feedback
  • might be production ready
  • adopt styles (rounded corners)
• #1602 - sequence summary
• #662 - Variation display

Intermine Training (JW, JB)

• going through documentation
  • updating as he goes through
• biggest issues - doesn't have a machine right now
  • dev machine busy
  • looking at copying database

GFF3 (JB, AC)

• on hold till WS240

GBrowse tests

• regenerated reference set
  • everything fine but tier II or III species