Difference between revisions of "WormBase SAB Meeting"
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California Institute of Technology, February 3-4, 2011 | California Institute of Technology, February 3-4, 2011 | ||
− | + | Wednesday 21st May – Pre-meeting (WormBase staff only) | |
6:30 – 18:00 Put right the World | 6:30 – 18:00 Put right the World | ||
− | + | Thursday 3rd May – Millikan Board Room | |
BELOW IS 2008 SCHEDULE | BELOW IS 2008 SCHEDULE | ||
− | + | 9:00 - 12:00: | |
Website, UI, Build, Orthology | Website, UI, Build, Orthology | ||
Line 19: | Line 19: | ||
* Comparative Analysis: (slides) | * Comparative Analysis: (slides) | ||
* modENCODE & Chado migration (slides) | * modENCODE & Chado migration (slides) | ||
− | + | WormMart, wormMine | |
− | + | 13:00 – 15:30 Sequence curation and analysis, other nematodes | |
* Introduction: John Spieth (slides) | * Introduction: John Spieth (slides) | ||
Line 28: | Line 28: | ||
* Future curation: Anthony Rogers (slides) | * Future curation: Anthony Rogers (slides) | ||
− | + | 15:30 - Literature Curation | |
− | * Textpresso-based Curation: Kimberly Van Auken (slides) | + | * New curation pipeline |
+ | Microarray curation | ||
+ | Textpresso-based Curation: Kimberly Van Auken (slides) | ||
* Overview;Phenotype Curation: Gary Schindelman (slides) | * Overview;Phenotype Curation: Gary Schindelman (slides) | ||
* Generalizing Phenote: Juancarlos Chan (slides) | * Generalizing Phenote: Juancarlos Chan (slides) | ||
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* Gene Regulation: Xioadong Wang (slides) | * Gene Regulation: Xioadong Wang (slides) | ||
− | + | General Discussion | |
* Coordination among sites | * Coordination among sites | ||
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* Database migration community annotation | * Database migration community annotation | ||
− | + | Friday 4th February | |
− | 8: | + | 8:00 – 9:00 Advisors breakfast |
9:30 – 12:00 Advisors summary report | 9:30 – 12:00 Advisors summary report | ||
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− | |||
− |
Revision as of 01:11, 6 January 2011
2011 Scientific Advisory Board Meeting
California Institute of Technology, February 3-4, 2011
Wednesday 21st May – Pre-meeting (WormBase staff only)
6:30 – 18:00 Put right the World Thursday 3rd May – Millikan Board Room
BELOW IS 2008 SCHEDULE 9:00 - 12:00:
Website, UI, Build, Orthology
* Introduction: Hinxton Reorganization Paul Sternberg * New Website: Todd Harris (slides) * Genome Browser (slides) * Build Process: (slides) * Comparative Analysis: (slides) * modENCODE & Chado migration (slides) WormMart, wormMine
13:00 – 15:30 Sequence curation and analysis, other nematodes
* Introduction: John Spieth (slides) * Curation Tool: Gary Williams (slides) * Current methods and metrics: Paul Davis (slides) * Briggsae curation and SNPS: Darin Blasiar (slides) * Future curation: Anthony Rogers (slides)
15:30 - Literature Curation
* New curation pipeline
Microarray curation
Textpresso-based Curation: Kimberly Van Auken (slides) * Overview;Phenotype Curation: Gary Schindelman (slides) * Generalizing Phenote: Juancarlos Chan (slides) * Genetics: Mary Ann Tuli (slides) * Cell-centric curation: Raymond Lee (slides) * Gene Regulation: Xioadong Wang (slides)
General Discussion
* Coordination among sites * Quality control * Outreach * Database migration community annotation
Friday 4th February
8:00 – 9:00 Advisors breakfast
9:30 – 12:00 Advisors summary report