Difference between revisions of "WormBase SAB Meeting"
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California Institute of Technology, February 3-4, 2011 | California Institute of Technology, February 3-4, 2011 | ||
| − | Wednesday 21st May – Pre- | + | [edit] Wednesday 21st May – Pre-Meeting (WormBase staff only) |
6:30 – 18:00 Put right the World | 6:30 – 18:00 Put right the World | ||
| − | Thursday 3rd May – Millikan Board Room | + | [edit] Thursday 3rd May – Millikan Board Room |
| − | + | ||
| − | 9:00 - 12:00: | + | [edit] 9:00 - 12:00: |
| + | * Introduction: Where we are; Hinxton Reorganization Paul Sternberg | ||
| + | * Models | ||
| + | Build Process: (slides) | ||
| + | * New Website: Todd Harris (slides) | ||
| + | |||
| + | |||
| + | * Sequence curation manual versus RNA-seq : (slides) | ||
| + | |||
| + | IBELOW IS stil mostly 2008 SCHEDULE | ||
Website, UI, Build, Orthology | Website, UI, Build, Orthology | ||
| Line 19: | Line 28: | ||
* Comparative Analysis: (slides) | * Comparative Analysis: (slides) | ||
* modENCODE & Chado migration (slides) | * modENCODE & Chado migration (slides) | ||
| − | + | ||
| − | 13:00 – 15:30 Sequence curation and analysis, other nematodes | + | [edit] 13:00 – 15:30 Sequence curation and analysis, other nematodes |
* Introduction: John Spieth (slides) | * Introduction: John Spieth (slides) | ||
| Line 28: | Line 37: | ||
* Future curation: Anthony Rogers (slides) | * Future curation: Anthony Rogers (slides) | ||
| − | 15:30 - Literature Curation | + | [edit] 15:30 - Literature Curation |
| − | * | + | * Textpresso-based Curation: Kimberly Van Auken (slides) |
| − | |||
| − | |||
* Overview;Phenotype Curation: Gary Schindelman (slides) | * Overview;Phenotype Curation: Gary Schindelman (slides) | ||
* Generalizing Phenote: Juancarlos Chan (slides) | * Generalizing Phenote: Juancarlos Chan (slides) | ||
| Line 39: | Line 46: | ||
* Gene Regulation: Xioadong Wang (slides) | * Gene Regulation: Xioadong Wang (slides) | ||
| − | General Discussion | + | [edit] General Discussion |
* Coordination among sites | * Coordination among sites | ||
| Line 46: | Line 53: | ||
* Database migration community annotation | * Database migration community annotation | ||
| − | Friday | + | [edit] Friday 23rd May |
| − | 8: | + | 8:30 – 9:00 Advisors breakfast |
9:30 – 12:00 Advisors summary report | 9:30 – 12:00 Advisors summary report | ||
| + | |||
| + | 12:00 – 13:00 Lunch | ||
| + | |||
| + | 13:00 – Discussion | ||
Revision as of 16:12, 6 January 2011
2011 Scientific Advisory Board Meeting
California Institute of Technology, February 3-4, 2011
[edit] Wednesday 21st May – Pre-Meeting (WormBase staff only)
6:30 – 18:00 Put right the World [edit] Thursday 3rd May – Millikan Board Room
[edit] 9:00 - 12:00:
* Introduction: Where we are; Hinxton Reorganization Paul Sternberg
* Models
Build Process: (slides)
* New Website: Todd Harris (slides)
* Sequence curation manual versus RNA-seq : (slides)
IBELOW IS stil mostly 2008 SCHEDULE
Website, UI, Build, Orthology
* Introduction: Hinxton Reorganization Paul Sternberg * New Website: Todd Harris (slides) * Genome Browser (slides) * Build Process: (slides) * Comparative Analysis: (slides) * modENCODE & Chado migration (slides)
[edit] 13:00 – 15:30 Sequence curation and analysis, other nematodes
* Introduction: John Spieth (slides) * Curation Tool: Gary Williams (slides) * Current methods and metrics: Paul Davis (slides) * Briggsae curation and SNPS: Darin Blasiar (slides) * Future curation: Anthony Rogers (slides)
[edit] 15:30 - Literature Curation
* Textpresso-based Curation: Kimberly Van Auken (slides) * Overview;Phenotype Curation: Gary Schindelman (slides) * Generalizing Phenote: Juancarlos Chan (slides) * Genetics: Mary Ann Tuli (slides) * Cell-centric curation: Raymond Lee (slides) * Gene Regulation: Xioadong Wang (slides)
[edit] General Discussion
* Coordination among sites * Quality control * Outreach * Database migration community annotation
[edit] Friday 23rd May
8:30 – 9:00 Advisors breakfast
9:30 – 12:00 Advisors summary report
12:00 – 13:00 Lunch
13:00 – Discussion
