|
|
| (200 intermediate revisions by 16 users not shown) |
| Line 1: |
Line 1: |
| − | <center><b>
| |
| − | <font size="5" color="Blue">WormBase Scientific Advisory Board Meeting
| |
| | | | |
| − | [[File:Caltechlogo.gif|frame|none]]California Institute of Technology, February 3rd - 4th 2011 | + | = Meeting list = |
| − | </font>
| + | [[2018_Advisory_Board_Meeting | 2018 SAB Meeting]] |
| − | </b></center>
| |
| − | __TOC__
| |
| | | | |
| − | ==Wednesday 2nd Feb – Pre-Meeting==
| + | [[2016_Advisory_Board_Meeting | 2016 SAB Meeting]] |
| | | | |
| − | <b>(WormBase staff only)
| + | [[2014_Advisory_Board_Meeting | 2014 SAB Meeting]] |
| | | | |
| − | 6:30 – 18:00</b>
| + | [[2013_Advisory_Board_Meeting | 2013 SAB Meeting]] |
| | | | |
| − | Put right the World
| + | [[2011_Advisory_Board_Meeting | 2011 SAB Meeting]] |
| − | | |
| − | | |
| − | ==Thursday 3rd Feb – Millikan Board Room==
| |
| − | | |
| − | <b>
| |
| − | ===9:00 - 12:00:Website, UI, Build, Orthology===
| |
| − | </b>
| |
| − | | |
| − | * Introduction: Where we are; Hinxton Reorganization - Paul Sternberg (15 min)
| |
| − | | |
| − | * Build process - Kevin Howe
| |
| − | | |
| − | * New Website:
| |
| − | * Tour of the new website (Abby; 30 minutes)
| |
| − | | |
| − | * Genome Browser:
| |
| − | | |
| − | * Site usage; introduction to the new site (Todd; 30 minutes)
| |
| − | | |
| − | * Process and pathway curation and display
| |
| − | | |
| − | <b>
| |
| − | ===13:00 – 15:30 Sequence curation and analysis, other nematodes===
| |
| − | </b>
| |
| − | | |
| − | * C. elegans(+ Tier II) Manual curation and projects? - Paul D. (20 mins)
| |
| − | | |
| − | * Large scale datasets (curation/modENCODE) - Gary W. (30 mins)
| |
| − | | |
| − | * Tier II genome (re)submissions -
| |
| − | | |
| − | * Other genome analysis -
| |
| − | | |
| − | | |
| − | <b>
| |
| − | ===15:30 - Literature Curation===
| |
| − | </b>
| |
| − | | |
| − | * Ontology Annotator : Juancarlos Chan
| |
| − | | |
| − | Possible topics:
| |
| − | | |
| − | * Gene Function Curation - concise descriptions (update on numbers, curation approach)
| |
| − | | |
| − | * Collaboration with other Databases/Projects - automation (ARRA), BioGRID, GO
| |
| − | | |
| − | <b>
| |
| − | ===General Discussion===
| |
| − | DISCUSSION TOPICS
| |
| − | Sequence curation manual versus RNA-seq; how do we automate creation of new isoforms
| |
| − | Handling EST-based and fragmented genomes
| |
| − | GBrowse: making it -seq friendly
| |
| − | Interaction browser: what shall we use?
| |
| − | Resequencing a standard N2 isolate
| |
| − | </b>
| |
| − | | |
| − | * Coordination among sites
| |
| − | | |
| − | * Quality control
| |
| − | | |
| − | * Outreach
| |
| − | | |
| − | * Database migration community annotation
| |
| − | | |
| − | ==Friday 4th Feb – Millikan Board Room==
| |
| − | | |
| − | 8:30 – 9:00 Advisors breakfast
| |
| − | | |
| − | 9:30 – 12:00 Advisors summary report
| |
| − | | |
| − | 12:00 – 13:00 Lunch
| |
| − | | |
| − | 13:00 – Discussion
| |
| − | | |
| − | | |
| − | == Arrivals/Departures ==
| |
| − | | |
| − | <b>Arrive</b>
| |
| − | | |
| − | * Hinxton Crew - Pasadena Tuesday afternoon/evening?
| |
| − | | |
| − | | |
| − | <b>Depart</b>
| |
| − | | |
| − | * Hinxton Crew minus Michael - Pasadena Sunday before lunch?
| |
| − | * Michael P. - Pasadena Friday PM?
| |
