Difference between revisions of "WormBase SAB Meeting"

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'''2011 Scientific Advisory Board Meeting'''
 
== Headline text ==
 
SAB Meeting 2011
 
== Headline text ==
 
  
 +
= Meeting list =
 +
[[2018_Advisory_Board_Meeting | 2018 SAB Meeting]]
  
 +
[[2016_Advisory_Board_Meeting | 2016 SAB Meeting]]
  
California Institute of Technology, February 3-4, 2011
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[[2014_Advisory_Board_Meeting | 2014 SAB Meeting]]
  
[edit] Wednesday 21st May – Pre-Meeting (WormBase staff only)
+
[[2013_Advisory_Board_Meeting | 2013 SAB Meeting]]
  
6:30 – 18:00 Put right the World
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[[2011_Advisory_Board_Meeting | 2011 SAB Meeting]]
[edit] Thursday 3rd May – Millikan Board Room
 
 
 
 
 
[edit] 9:00 - 12:00:
 
    * Introduction: Where we are; Hinxton Reorganization Paul Sternberg
 
    * Models
 
      Build Process:  (slides)
 
 
 
    * Site usage; introduction to the new site (Todd; 30 minutes)
 
    * Tour of the new website (Abby; 30 minutes)   
 
 
 
 
 
Process and pathway curation and display
 
 
 
 
 
 
 
DISCUSSION TOPICS
 
    Sequence curation manual versus RNA-seq; how do we automate creation of new isoforms
 
    Handling EST-based and fragmented genomes
 
    GBrowse: making it -seq friendly
 
    Interaction browser:  what shall we use?
 
 
 
 
 
IBELOW IS stil mostly 2008 SCHEDULE
 
 
 
Website, UI, Build, Orthology
 
 
 
    * Introduction: Hinxton Reorganization Paul Sternberg
 
    * New Website: Todd Harris (slides)
 
    * Genome Browser      (slides)
 
    * Build Process:  (slides)
 
    * Comparative Analysis:  (slides)
 
    * modENCODE & Chado migration (slides)
 
 
 
[edit] 13:00 – 15:30 Sequence curation and analysis, other nematodes
 
 
 
    * Introduction: John Spieth (slides)
 
    * Curation Tool: Gary Williams (slides)
 
    * Current methods and metrics: Paul Davis (slides)
 
    * Briggsae curation and SNPS: Darin Blasiar (slides)
 
    * Future curation: Anthony Rogers (slides)
 
 
 
[edit] 15:30 - Literature Curation
 
 
 
    * Textpresso-based Curation: Kimberly Van Auken (slides)
 
    * Overview;Phenotype Curation: Gary Schindelman (slides)
 
    * Generalizing Phenote: Juancarlos Chan (slides)
 
    * Genetics: Mary Ann Tuli (slides)
 
    * Cell-centric curation: Raymond Lee (slides)
 
    * Gene Regulation: Xioadong Wang (slides)
 
 
 
[edit] General Discussion
 
 
 
    * Coordination among sites
 
    * Quality control
 
    * Outreach
 
    * Database migration community annotation
 
 
 
[edit] Friday 23rd May
 
 
 
8:30 – 9:00 Advisors breakfast
 
 
 
9:30 – 12:00 Advisors summary report
 
 
 
12:00 – 13:00 Lunch
 
 
 
13:00 – Discussion
 
 
 
== Headline text ==
 

Latest revision as of 12:39, 7 June 2018