Difference between revisions of "WormBase Model:WBProcess"
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</pre> | </pre> | ||
== Proposed Changes == | == Proposed Changes == | ||
| + | ===WS243=== | ||
| + | change ''Related_process ?WBProcess XREF Related_process'' | ||
| + | to | ||
| + | <pre> | ||
| + | Related_process Specialisation_of ?WBProcess XREF Generalisation_of | ||
| + | Generalisation_of ?WBProcess XREF Specialisation_of | ||
| + | </pre> | ||
==Approved Changes== | ==Approved Changes== | ||
| + | ===WS236=== | ||
| + | DO_term ?DO_term #Evidence //From new class ?Gene and Disease Ontology | ||
===WS233=== | ===WS233=== | ||
| + | <pre style="white-space: pre-wrap; | ||
| + | white-space: -moz-pre-wrap; | ||
| + | white-space: -pre-wrap; | ||
| + | white-space: -o-pre-wrap; | ||
| + | word-wrap: break-word;"> | ||
Summary ?Text #Evidence //Added to store summary display details and evidence tracking. | Summary ?Text #Evidence //Added to store summary display details and evidence tracking. | ||
Public_name //Again a text addition for display purposes. | Public_name //Again a text addition for display purposes. | ||
Pathway DB_info Database ?Database ?Database_field ?Accession_number //Can be used for any pathway db with unique accessionIDs | Pathway DB_info Database ?Database ?Database_field ?Accession_number //Can be used for any pathway db with unique accessionIDs | ||
| + | </pre> | ||
| − | |||
| − | |||
==Unused tags== | ==Unused tags== | ||
Latest revision as of 01:07, 6 February 2014
Contents
Curator Comments/Description
Approved for WS225.
Model
//////////////////////////////////////////////////
//
// WBProcess class Model - Proposed by Karen Yook WS225
// Connects to: ?Gene
// ?Expression_cluster
// ?Interaction
// ?Anatomy_term
// ?Life_stage
// ?Molecule
// ?Phenotype
//
//////////////////////////////////////////////////
?WBProcess Name ?Text
Summary ?Text #Evidence
Process_term ?Text
Other_name ?Text
Related_process ?WBProcess XREF Related_process
Taxon NCBITaxonomyID ?Text
Involved_entity Gene ?Gene XREF WBProcess #Evidence
Expression_cluster ?Expression_cluster XREF WBProcess #Evidence
Interaction ?Interaction XREF WBProcess #Evidence
Anatomy_term ?Anatomy_term XREF WBProcess #Evidence
Life_stage ?Life_stage XREF WBProcess #Evidence
Molecule ?Molecule XREF WBProcess #Evidence
Associated_with Phenotype ?Phenotype XREF WBProcess #Evidence
GO_term ?GO_term #Evidence
Picture ?Picture #Evidence
Movie ?Movie #Evidence
Pathway DB_info Database ?Database_field ?Accession_number //Can be used for any pathway db with unique accessionIDs
Remark ?Text #Evidence
Reference ?Paper XREF WBProcess
Additions to XREF'd classes:
---------------------------
WBProcess ?WBProcess XREF Gene #Evidence
WBProcess ?WBProcess XREF Interaction
WBProcess ?WBProcess XREF Anatomy_term
WBProcess ?WBProcess XREF Life_stage
WBProcess ?WBProcess XREF Phenotype
WBProcess ?WBProcess XREF Expression_cluster #Evidence
WBProcess ?WBProcess XREF Reference
WBProcess ?WBProcess XREF Molecule
Proposed Changes
WS243
change Related_process ?WBProcess XREF Related_process to
Related_process Specialisation_of ?WBProcess XREF Generalisation_of
Generalisation_of ?WBProcess XREF Specialisation_of
Approved Changes
WS236
DO_term ?DO_term #Evidence //From new class ?Gene and Disease Ontology
WS233
Summary ?Text #Evidence //Added to store summary display details and evidence tracking. Public_name //Again a text addition for display purposes. Pathway DB_info Database ?Database ?Database_field ?Accession_number //Can be used for any pathway db with unique accessionIDs
