Difference between revisions of "WormBase-Caltech Weekly Calls"
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==August 6th, 2020== | ==August 6th, 2020== | ||
===Experimental conditions data flow into Alliance=== | ===Experimental conditions data flow into Alliance=== | ||
− | *Experimental conditions | + | *Experimental conditions in disease annotations: WB has inducers (used to recapitulate the disease condition) and modifiers (a modifier can ameliorate, exacerbate, or have no effect, on the disease condition) |
*We use the WB Molecule CV for Inducers and Modifiers in disease annotation | *We use the WB Molecule CV for Inducers and Modifiers in disease annotation | ||
− | * | + | *Experimental conditions in phenotype annotations: are free text (captured in remarks); will probably need to formalize later on |
*So for data flow into Alliance: | *So for data flow into Alliance: | ||
**In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this) | **In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this) | ||
− | ** | + | **Groups will switch to using common data model that works for all and common ontology/ontologies in the near future. |
Revision as of 23:18, 5 August 2020
Contents
Previous Years
2020 Meetings
August 6th, 2020
Experimental conditions data flow into Alliance
- Experimental conditions in disease annotations: WB has inducers (used to recapitulate the disease condition) and modifiers (a modifier can ameliorate, exacerbate, or have no effect, on the disease condition)
- We use the WB Molecule CV for Inducers and Modifiers in disease annotation
- Experimental conditions in phenotype annotations: are free text (captured in remarks); will probably need to formalize later on
- So for data flow into Alliance:
- In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this)
- Groups will switch to using common data model that works for all and common ontology/ontologies in the near future.