Difference between revisions of "WBConfCall 2021.01.21-Agenda and Minutes"
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= Help Desk = | = Help Desk = | ||
− | * ePCR tool is not working. [https://github.com/WormBase/website/issues/8049 #8049] - | + | * ePCR tool is not working. [https://github.com/WormBase/website/issues/8049 #8049] - Electronic-PCR (e-PCR) is retiring, use [https://ncbiinsights.ncbi.nlm.nih.gov/2017/06/28/e-pcr-is-retiring-use-primer-blast/ Primer-BLAST] instead? |
− | * The [https://wormbase.org/about/userguide/nomenclature#65b9k4hiedca01mgl37f2j8--10- nomenclature] page can not be printed. The dialog boxes are overlapped with the contents. [https://github.com/WormBase/website/issues/8055 #8055],[https://github.com/WormBase/website/issues/8056 #8056] - Only Copy&paste of the contents is the solution now. | + | Alternative at UCSC [https://www.genome.ucsc.edu/cgi-bin/hgPcr?wp_target=&db=0&org=C.+elegans] |
+ | |||
+ | * The [https://wormbase.org/about/userguide/nomenclature#65b9k4hiedca01mgl37f2j8--10- nomenclature] page can not be printed as shown in the page. The dialog boxes are overlapped with the contents in the printout. [https://github.com/WormBase/website/issues/8055 #8055],[https://github.com/WormBase/website/issues/8056 #8056] - Only Copy&paste of the contents is the solution now. | ||
+ | |||
+ | * Life stage specific expression data for gene set. [https://github.com/WormBase/website/issues/8057 #8057]- Daniela responded this morning | ||
+ | |||
+ | * Hello, I’m a student in Dr. Andrew Fi... [https://github.com/WormBase/website/issues/8060]. Source of data is unknown | ||
= Agenda and Minutes= | = Agenda and Minutes= | ||
+ | ===ePCR tool=== | ||
+ | *The tool was not working because of disconnecting the blast database. After fixing the connection, ePCR tool is working now. | ||
+ | *Other ePCR tool is available at UCSC. | ||
+ | |||
+ | ===Wormbase wen page printing issue=== | ||
+ | *User couldn't print out the nomenclature document page as displayed in the web page. | ||
+ | *Sibyl is now working on it to solve the issue. | ||
+ | |||
+ | ===References for the Genome browser tracks=== | ||
+ | *We must keep the sources and references of every tracks in the genome browser for users as well as curation processes. | ||
+ | *Do we need to reorganize the Jbrowse tracks after migrating it to AGR? Organizing the tracks is needed to add more useful features like cell-specific gene expression data or predicted TF binding site/motif. |
Latest revision as of 21:19, 21 January 2021
Contents
Help Desk
- ePCR tool is not working. #8049 - Electronic-PCR (e-PCR) is retiring, use Primer-BLAST instead?
Alternative at UCSC [1]
- The nomenclature page can not be printed as shown in the page. The dialog boxes are overlapped with the contents in the printout. #8055,#8056 - Only Copy&paste of the contents is the solution now.
- Life stage specific expression data for gene set. #8057- Daniela responded this morning
- Hello, I’m a student in Dr. Andrew Fi... [2]. Source of data is unknown
Agenda and Minutes
ePCR tool
- The tool was not working because of disconnecting the blast database. After fixing the connection, ePCR tool is working now.
- Other ePCR tool is available at UCSC.
Wormbase wen page printing issue
- User couldn't print out the nomenclature document page as displayed in the web page.
- Sibyl is now working on it to solve the issue.
References for the Genome browser tracks
- We must keep the sources and references of every tracks in the genome browser for users as well as curation processes.
- Do we need to reorganize the Jbrowse tracks after migrating it to AGR? Organizing the tracks is needed to add more useful features like cell-specific gene expression data or predicted TF binding site/motif.