Difference between revisions of "WBConfCall 2019.03.21-Agenda and Minutes"
From WormBaseWiki
Jump to navigationJump to searchm (→IWM) |
m |
||
(2 intermediate revisions by 2 users not shown) | |||
Line 7: | Line 7: | ||
word-wrap: break-word"> | word-wrap: break-word"> | ||
Draft talks/speakers | Draft talks/speakers | ||
− | |||
− | |||
− | |||
− | |||
− | |||
− | + | Introduction to the gene page | |
+ | |||
+ | Data Mining Tools | ||
+ | Simple Mine | ||
+ | WormMine | ||
+ | ParaSite BioMart | ||
+ | Enrichment Analysis | ||
+ | |||
+ | Visualization and other tools | ||
+ | WormBase Ontology Browser | ||
JBrowse Scott Cain | JBrowse Scott Cain | ||
− | + | ||
Find cross species data at the Alliance of Genome Resources | Find cross species data at the Alliance of Genome Resources | ||
− | Community curation-Author first pass and other data submission forms Kimberly | + | Community curation-Author first pass and other data submission forms Kimberly |
</pre> | </pre> | ||
Line 42: | Line 46: | ||
* we want to finalise the time plan mid-April. Ideally first week of April (Ranjana) | * we want to finalise the time plan mid-April. Ideally first week of April (Ranjana) | ||
** we could submit a list of talks and speaker and tweak it later | ** we could submit a list of talks and speaker and tweak it later | ||
+ | |||
+ | == BioCuration Meeting == | ||
+ | * Kevin & Kimberly is going | ||
+ | |||
+ | == GO Meeting == | ||
+ | * Kimberly is going | ||
+ | * there may be changes to interpro2go |
Latest revision as of 17:48, 1 April 2019
Contents
Agenda
Finalize talks/speakers for IWM
Draft talks/speakers Introduction to the gene page Data Mining Tools Simple Mine WormMine ParaSite BioMart Enrichment Analysis Visualization and other tools WormBase Ontology Browser JBrowse Scott Cain Find cross species data at the Alliance of Genome Resources Community curation-Author first pass and other data submission forms Kimberly
Open helpdesk tickets
- WBPaper00055606 - Daniela
- Login - Web Team
- SPELL - CalTech
- Variation - Paul D
- ModENCODE / Expression - CalTech?
- N2 Reference life span
- some error 500 tickets
- WormBase footer update from Paul S
Minutes
IWM
- micropublications will have a breakfast slot (Daniela / Karen)
- will also do a micropublication slot in the WormBase workshop (Daniela / Karen)
- there should be an open floor at the end of the Workshop
- rotating mini-presentations at the WormBase booth
- we might do a talk in the Bridging The Divide / Parasite Workshop (Kevin)
- there will be a large scale data mining talk - SimpleMine & WormMine & ParaSite BioMart (Chris / Paolo)
- volunteers for the AGR talk (Chris?)
- maybe we can leverage the flow from the CalTech site visits to organise the workshop (Raymond / Kimberley)
- we want to finalise the time plan mid-April. Ideally first week of April (Ranjana)
- we could submit a list of talks and speaker and tweak it later
BioCuration Meeting
- Kevin & Kimberly is going
GO Meeting
- Kimberly is going
- there may be changes to interpro2go