Difference between revisions of "WBConfCall 2015.11.05-Agenda and Minutes"
From WormBaseWiki
Jump to navigationJump to searchm (→Agenda) |
|||
Line 2: | Line 2: | ||
* WS252 models deadline | * WS252 models deadline | ||
* SObA phenotype graph re-worked using cytoscape.js | * SObA phenotype graph re-worked using cytoscape.js | ||
+ | * Generating lists of transcription factor target genes | ||
= Minutes = | = Minutes = |
Revision as of 16:19, 5 November 2015
Agenda
- WS252 models deadline
- SObA phenotype graph re-worked using cytoscape.js
- Generating lists of transcription factor target genes
Minutes
- SObA (Summary of Ontology-based Annotation) graph for phenotype: examples
daf-3 <http://131.215.12.204/~azurebrd/cgi-bin/amigo.cgi?action=annotSummaryCytoscape&focusTermId=WBGene00000899> daf-2 <http://131.215.12.204/~azurebrd/cgi-bin/amigo.cgi?action=annotSummaryCytoscape&focusTermId=WBGene00000898>
Re-worked from an earlier version which was based on Graphviz. It is to be made into a widget on Gene pages, immediately below the Phenotypes widget, providing a summarized view of a gene's annotated phenotypes in an ontology-aware manner.