Difference between revisions of "WBConfCall 2013.10.02-Agenda and Minutes"
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== Elsevier linking == | == Elsevier linking == | ||
Kevin and Todd to write an agreement email to Daniela. Daniela will forward to Elsevier. | Kevin and Todd to write an agreement email to Daniela. Daniela will forward to Elsevier. | ||
+ | |||
+ | == Expression visualization (Joachim) == | ||
+ | |||
+ | * aggregation data by conditions - pretexted, control vocabulary, ontology | ||
+ | ** life stage | ||
+ | ** tissues | ||
+ | ** relicates | ||
+ | ** expriments | ||
+ | |||
+ | * interactive, on-the-fly image generation | ||
+ | ** filter button | ||
+ | ** pre-processed tables, since acedb is slow | ||
+ | |||
+ | * is not working now with safari yet | ||
+ | |||
+ | more discussions on RNAseq expression visualization, please follow: | ||
+ | https://github.com/WormBase/website/issues/885# | ||
+ | |||
+ | == WS241 upload schedule == | ||
+ | |||
+ | * model release on 11/22/2013 | ||
+ | * data upload on 11/29/2013 | ||
+ | |||
+ | |||
+ | == Help desk issues: == | ||
+ | * https://github.com/WormBase/website/issues/1795 - Abby is working on it for WS240 | ||
+ | * https://github.com/WormBase/website/issues/1804 - Response to user directly by Xiaodong | ||
+ | * https://github.com/WormBase/website/issues/1780 - webteam will look into it | ||
+ | * https://github.com/WormBase/website/issues/1765 - Done. Issure closed. | ||
+ | * https://github.com/WormBase/website/issues/1788 - Abby thinks it's working. Raymond will test it. | ||
+ | |||
+ | == NameServer2 == | ||
+ | * will be ready for testing outside of Hinxton Friday or Monday |
Latest revision as of 18:31, 3 October 2013
Contents
Agenda
Please add your agenda items here.
SAB
Make a final decision about timing and location of SAB, so that people can plan holidays and other meetings accordingly.
Elsevier linking
To summarize: Elsevier would like to put a link to Wormbase via adding a logo on the ScienceDirect pages, in the same fashion they are doing for MGI and EMAGE. go here
http://www.sciencedirect.com/science/article/pii/S0012160604007456 and look on the right column 'Data for this article'
The link to Wormbase will point to the paper page showing the referenced curated data e.g. http://www.wormbase.org/resources/paper/WBPaper00001770#30--10
In order to do this they want us to approve the following statement
"By emailing this logo, I grant Elsevier and its sub-licensees a royalty-free, perpetual, irrevocable, worldwide, non-exclusive right and license to display, publish and otherwise use this logo in any format in connection with the linking between [DATABASE NAME] and ScienceDirect. [NAME] [DATABASE NAME]"
Caltech attorneys gave the green light but they would like to have the OK from other Wormbase members. So they need an e-mail from somebody at Hinxton and OICR stating that there are no objections.
Expression visualization (Joachim)
- data naming conventions
- data consolidation
WS241 upload schedule
Help desk issues:
- https://github.com/WormBase/website/issues/1795
- https://github.com/WormBase/website/issues/1804
- https://github.com/WormBase/website/issues/1780
- https://github.com/WormBase/website/issues/1765
- https://github.com/WormBase/website/issues/1788
NameServer2
- will be ready for testing outside of Hinxton Friday or Monday
Apologies for absence: Mary Ann
Minutes
SAB
move to next call, since Paul is not in the meeting
Elsevier linking
Kevin and Todd to write an agreement email to Daniela. Daniela will forward to Elsevier.
Expression visualization (Joachim)
- aggregation data by conditions - pretexted, control vocabulary, ontology
- life stage
- tissues
- relicates
- expriments
- interactive, on-the-fly image generation
- filter button
- pre-processed tables, since acedb is slow
- is not working now with safari yet
more discussions on RNAseq expression visualization, please follow: https://github.com/WormBase/website/issues/885#
WS241 upload schedule
- model release on 11/22/2013
- data upload on 11/29/2013
Help desk issues:
- https://github.com/WormBase/website/issues/1795 - Abby is working on it for WS240
- https://github.com/WormBase/website/issues/1804 - Response to user directly by Xiaodong
- https://github.com/WormBase/website/issues/1780 - webteam will look into it
- https://github.com/WormBase/website/issues/1765 - Done. Issure closed.
- https://github.com/WormBase/website/issues/1788 - Abby thinks it's working. Raymond will test it.
NameServer2
- will be ready for testing outside of Hinxton Friday or Monday