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- * Ranjana working with Juancarlos to run and update automated descriptions pipeline * First draft up on WormBase development site8 KB (1,289 words) - 18:11, 10 November 2016
- === Gene descriptions === ...out poll if you are interested in attending; have responses from Kimberly and Gary S.9 KB (1,364 words) - 15:39, 7 February 2019
- * Current projects and report the steady state ...an) knock-in GFP in frame and use RNAi against GFP to knockdown endogenous gene6 KB (912 words) - 01:40, 15 September 2017
- * Wen will create ticket to create wormbase.org URL * Wen, Chris, and Juancarlos have been working on updating older timestamps for OA entries in8 KB (1,224 words) - 15:34, 21 July 2016
- ===Dates and Location=== * Monday 6th October: whole-group advisory board meeting (talks and discussion), EBI3 KB (438 words) - 07:19, 6 October 2014
- ='''WormBase Gene Ontology Progress Report, December 2011'''= Developer, WormBase, Caltech, Pasadena, CA.13 KB (1,830 words) - 16:40, 13 December 2012
- * Michael and Valerio were awarded AWS credits, more than they can use === Automated gene descriptions ===5 KB (670 words) - 15:31, 3 June 2021
- *May take longer than previously expected to get up and running *Yuling should contact FlyBase to make sure they're OK, once he has WormBase SVM working7 KB (1,064 words) - 19:12, 3 November 2011
- * Users could specify groups of data (with checkboxes): gene IDs/names, phenotypes, orthology, etc. === Gene Ontology SObA graph ===7 KB (1,010 words) - 17:08, 4 May 2017
- * There are papers in the WormBase collection that are used as paper evidence for some concise descriptions * Many of these were coming up in the disease paper pipeline6 KB (823 words) - 19:38, 2 January 2014
- === WormBase Ontology Browser (WOBr) === ...erver for the information the browser queries: gene ontology associations, gene association files13 KB (1,983 words) - 16:40, 7 November 2013
- = The A - Z of WormBase Models = Document created from [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup&pathrev=WS218 WS218] models.16 KB (2,207 words) - 23:06, 9 January 2014
- * Juancarlos and Raymond looking for feedback; let them know ...leMine is Caltech hosted so we'd need to look at Tazendra logs to see who (and how many people) are using the tool (cannot rule out bots etc.)6 KB (911 words) - 17:13, 6 June 2019
- * Who from WormBase will go? * Working out how inferred annotations propagate from Noctua/LEGO model to GAF9 KB (1,377 words) - 16:44, 2 February 2017
- === Automated gene descriptions - orthology === * WormBase uses EnsemblCompara and other methods (not aggregate method like DIOPT)12 KB (1,809 words) - 16:33, 1 March 2018
- *WormBase - Bitbucket, GitHub (can commit code) *Is WormBase interested connecting to it?7 KB (1,117 words) - 16:39, 4 August 2011
- * Apologies from Mary Ann - in Strasboug. Might try and Skype in. - Mary Ann joined in at the end of the call. ...Karen, others are welcome. Visit the construct model requests [http://wiki.wormbase.org/index.php/WormBase_Model:Construct here]10 KB (1,583 words) - 18:16, 5 February 2014
- * Life_stage and Anatomy_term * Couples (or attempts to) time-and-space (life_stage-and-anatomy) annotation of expression pattern6 KB (857 words) - 16:01, 2 October 2014
- * Would be good to meet with individual labs and lab members to discuss WormBase * Will probably decline this offer and wait until a longer talk next year11 KB (1,664 words) - 16:29, 7 December 2017
- ...e are automated conversion systems being established to convert ACEDB data and models into Datomic * The Datomic data models and querying language may take some time to get used to5 KB (776 words) - 16:50, 7 January 2016
