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- == Specific topics for project meeting / working groups == ** Working more closely with other MODs8 KB (1,130 words) - 13:27, 4 February 2016
- If there are not enough blue A papers, the next group to look at are the C, T and cyan A papers. ...o step away. At the moment that is not set up. However, if you have been working on something and need to leave, you can just send the flags that already ex4 KB (751 words) - 23:40, 13 August 2010
- * Wen was working on simplification of SimpleMine output * Curators will send group Skype handle and requested time to talk14 KB (2,226 words) - 15:31, 7 June 2018
- *Almost sorted out and working BioCreative group conference6 KB (903 words) - 16:37, 5 January 2012
- ...er researchers with common interests and dealing with common challenges of working with other species, to share recent technical advances that make new specie ...who can attend the workshop will gather information to report back to the group.4 KB (657 words) - 17:19, 15 June 2023
- === Alliance working group project plans ===11 KB (1,703 words) - 15:27, 5 April 2018
- group picture tomorrow multiple kinds in a single group13 KB (1,803 words) - 19:13, 11 April 2014
- * We need some trial LEGO curation to start working out the process * Working out how to handle different relationships, e.g. "part_of", "has_part"8 KB (1,234 words) - 12:36, 4 June 2014
- * Working out pipeline for curation * Adam (from Lincoln's group) working with OrientDB (graph database)6 KB (974 words) - 17:28, 3 September 2014
- How urgent is this? What timeframe should we be working towards? * Draft chapters can be circulated to a small group of worm researchers as they are ready (PS lab)4 KB (610 words) - 13:12, 14 November 2014
- =Phenotype Working Group --- Team Phene!=5 KB (653 words) - 00:23, 29 November 2014
- * Stavros - ftp error at EBI probably from ddos attack, admins have it working again. * Paulo - Sync is all through perl, but not working well right now. Can see Aug 31st files from last sync. Will take a look.9 KB (1,570 words) - 16:36, 21 September 2023
- *NLP research group in Germany *GSA papers will need to be rechecked to ensure that all links are working7 KB (1,158 words) - 17:20, 3 May 2012
- * Have been working on gene summaries * Do we want to start working on summaries for other entities, like variations?8 KB (1,262 words) - 15:34, 3 May 2018
- * Working on topics: displaying papers and data ** Daniela: Working towards automating as much of the processing pipeline as possible8 KB (1,121 words) - 14:01, 15 July 2019
- * Xiaodong and Sibyl working on * Bill Mohler et al working on desktop application10 KB (1,464 words) - 17:09, 13 August 2015
- * Raymond & Juancarlos have been working on autocomplete tool for search bar; not trivial ...bout the changes, was there any decision about if there will be a wormbase group login. I asked if they will be using logins to track activity on the site,8 KB (1,229 words) - 15:31, 1 June 2017
- *Ranjana, Kimberly working on form layout *We may consider working out more formal pipelines for submitting queries (maybe to Wen?)7 KB (1,047 words) - 15:34, 4 April 2013
- * Lots of groups working together on pathways * Group is trying to come up with model naming scheme11 KB (1,676 words) - 15:28, 2 May 2019
- **We can discuss, edit, and expand as a group Raymond working on development environment. Will host server at Caltech for now. Need to5 KB (850 words) - 15:32, 5 September 2013
- * May be nice to group all micropublications into a single official publication * Paul S. working on introduction7 KB (1,058 words) - 15:32, 2 April 2015
- *Todd is working on it; will do today * Still working on Unfolded Protein Response (UPR) for WS24113 KB (1,983 words) - 16:40, 7 November 2013
- *Alliance literature group [https://docs.google.com/spreadsheets/d/1d3Y73x1BFiARkbxrvPPX2tCh5rFeBQRoBM ...e author tag populated. Most of them were submitted even prior Wen started working on Expr_pattern.9 KB (1,377 words) - 16:36, 4 March 2021
- ...e these users and several preliminary directories. Creating a new user and group varies among Unix flavors. On most Linux systems, the following commands wi === User and group accounts ===28 KB (3,957 words) - 19:55, 5 May 2022
- * Michael working mostly off of KEGG pathways; metabolites have KEGG IDs * People will draw up potential designs and will send around to the group8 KB (1,305 words) - 23:24, 3 June 2015
- * Todd working on a spell.wormbase.org site for doing worm SPELL analyses ?Cell and ?Cell group could go away6 KB (906 words) - 15:34, 6 December 2018
- '''acedb group''' ...to the acedb directory tree. Acedb administrators should be added to this group.26 KB (3,522 words) - 19:10, 18 June 2014
- * steering group meeting coming up, so talks need to be planned (KLH) * Re-working modENCODE RNASeq data11 KB (1,714 words) - 11:04, 27 July 2015
- Working with Reactome *Chris will check Wiki and e-mail group6 KB (944 words) - 16:25, 1 November 2012
- ...for the first time including gene predictions imported from Ralf Sommer's group (paper in press). We have We are working on calculating base pair conservation scores (using GERP) between the caeno8 KB (936 words) - 16:48, 21 December 2011
- All changes proposed above were approved by the group * Juancarlos working on/proposing a plan to store UTF-8 characters in Postgres and the OA which11 KB (1,782 words) - 17:55, 13 May 2021
- ...on. Ranjana Kishore continues to participate in the efforts of the GO News group. ...unctional: antibody, small molecule and gene regulation. We are currently working on 2 new curation interfaces: gene regulation and expression pattern relate13 KB (1,830 words) - 16:40, 13 December 2012
- * Will update group if/when a slot is assigned (probably not until Fall 2020 at the earliest) ** Known issue: not working now; need to only search on public name when available, not on summary; Sib7 KB (989 words) - 16:08, 5 February 2020
- ...an important role in identifying sequencing prediction errors. You may be working on a gene that we have annotated as a pseudogene or vice versa and may have ...ich are organized in categories of an ontology (such as gene, cell or cell group, cellular component, association, regulation, and many more). Hits are disp10 KB (1,509 words) - 15:40, 24 September 2007
- ...s mutant backgrounds. One suggestion is to revisit possible strategies for working closer with WormAtlas on this issue. [see also Q4] [Paul S., Raymond, Linco ...alysis. For instance, you can (ideally automatically) identify communities working on the same disease, phenotype, or gene and make these available on the web11 KB (1,649 words) - 16:10, 19 July 2018
- An expression profile mountain represents a group of genes that are closely related in expression profile analysis. For more ...es are usually annotated in this way on the basis of comments from experts working on that gene family. Alternatively, some tRNA genes are classified as pseud8 KB (1,256 words) - 00:26, 31 August 2010
- ...large-scale data gets into WormBase faster even if published later. We are working to catch up with the considerable backlog of the individual RNAi experiment ...nger Institute: Anthony Rogers and Chao-Kung Chen have joined the WormBase group. Chao-Kung is half-time with the CGC, and is the key liason between WormBas7 KB (1,180 words) - 11:00, 21 December 2011
- *JD is working on; should have something ready by SAB ***Group data types by phenotype related classes10 KB (1,553 words) - 18:04, 7 February 2013
- ...e these users and several preliminary directories. Creating a new user and group varies among Unix flavors. On most Linux systems, the following commands wi === User and group accounts ===60 KB (9,496 words) - 23:06, 13 August 2010
- ...ve cross-section of the taxonomic diversity found within UniProtKB. We are working closely in collaboration with the INSDC, Ensembl and RefSeq to map all UniP representation of a particular taxonomic group29 KB (4,082 words) - 19:15, 11 April 2014
- ...changed the second conference call of the month to a more focussed smaller-group meeting on a specific topic. This seems to have failed (we've only had one Is it much different to the working version we had for WS244?15 KB (2,374 words) - 16:00, 17 July 2014
- Future: Working hand in hand with computational biologists - domain experts example of curators/computational bio/software engineers - working hand in hand37 KB (5,533 words) - 19:17, 11 April 2014
- Future: Working hand in hand with computational biologists - domain experts example of curators/computational bio/software engineers - working hand in hand37 KB (5,533 words) - 19:17, 11 April 2014
- * Karen: attending impromptu OICR group meeting, won't be on the Caltech call. * Karen working on cleaning up10 KB (1,474 words) - 15:54, 30 April 2014
- ...to flag all data types in a paper and either curate at WB or share with a group that does curate that data ** WormMine template was broken; model has been rolled back to WS260; working now. Here's the query:12 KB (1,930 words) - 17:12, 1 February 2018
- pocket to host acetyle group much larger in SIRT5 large enough for acyl group instead25 KB (3,541 words) - 19:14, 11 April 2014
- ...m paper, submitting to Database, biocuration issue (managed by biocuration group); authors have an opportunity to present at Biocuration conference * Sibyl working on mockups for including Textpresso derived paper associations in the Refer13 KB (2,025 words) - 16:28, 7 November 2019
- ...otentially curatable sentences are found within the <field_results> tags. Working from left to right on the curation form, here is how the information from t ...plement this universally, I think. This requires a mapping file from each group and a regular pipeline for updating the gene or protein names file.''17 KB (2,749 words) - 20:04, 21 January 2011
- The WormBoard is a representative group of working scientists and educators who use ''C. elegans'' or related nematodes as the16 KB (2,224 words) - 17:36, 25 August 2023
- *'''Rule 3''' : If 2 or more of these words occur: 'family', 'subfamily', group', 'member' 'polypeptide' or 'class', ignore them and resolve as in examples **nuclear receptor subfamily 3, group C, member 2 becomes nuclear receptor 3C265 KB (9,380 words) - 22:39, 5 July 2018
- ...ntracted to single DNA sites. A particularly good use of this viewer is in working out the clearest possible view of an evolutionarily complex syntenic region ...ional traits for this cell type. A single cell can belong to more than one group, defined either by cell class or by organ or tissue. Cells can be major pro19 KB (3,061 words) - 23:01, 13 August 2010
- ...porarily added to sandbox. -- J, I have not heard from anyone, I'll ask at group meeting tomorrow -k, everyone has been asked -k '''changed live--J''' ...u two are the only curators using the interaction autocomplete, so if it's working correctly, that's good, if it's not, talk to her and either have her tell m20 KB (3,088 words) - 19:17, 13 August 2020
- ** We are working on the UI for entity and topic addition ...not bringing in preprints from biorxiv (this is also what the Alliance lit group agreed) - do we need to re-visit this decision?36 KB (4,994 words) - 17:27, 14 February 2024
- ...d specific order for dumping all of the tags in the Structured_description group: testdb is the name of the postgres working database47 KB (6,852 words) - 04:27, 8 December 2020
- ...s off of the two_display.cgi (unless we change the two_display.cgi to keep working,do you want it to ?)'' YES ''from To Do below it's decided that we'll have * change two_display.cgi to keep working119 KB (18,888 words) - 00:05, 2 May 2014
- ...gment of the'' C. briggsae ''genome. ESTs can be ordered from the research group of Yuji Kohara (ykohara@lab.nig.ac.jp).'' ...org and through the on-line WormBase Users' Guide. The WormBase developers group actively invites suggestions for improvement from users, and WormBase's sou103 KB (16,375 words) - 23:39, 30 November 2010
