Difference between revisions of "Gene Ontology"
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Jump to navigationJump to search| Line 9: | Line 9: | ||
4. InterPro2GO mappings for sequence-based IEA annotations | 4. InterPro2GO mappings for sequence-based IEA annotations | ||
| − | 5. Reference Genome | + | 5. Reference Genome Inferential Annotations |
==Manual curation== | ==Manual curation== | ||
| + | *Reference Genome (see also [[Reference Genome Inferential Annotations]]) | ||
| + | #[[Lung Development Targets (November 2009 - February 2010)]] | ||
== Semi-automated curation == | == Semi-automated curation == | ||
| Line 26: | Line 28: | ||
*[[Phenotype2GO Mappings File]] | *[[Phenotype2GO Mappings File]] | ||
*[[Phenotype2GO Mappings Sept. 09]] | *[[Phenotype2GO Mappings Sept. 09]] | ||
| + | |||
| + | ==Reference Genome Inferential Annotations== | ||
Back to [[Caltech documentation]] | Back to [[Caltech documentation]] | ||
Revision as of 19:41, 6 February 2010
Gene Ontology curation at WormBase is performed through several different pipelines:
1. Manual curation of the literature
2. Semi-automated, Textpresso-based curation of Cellular Component and Molecular Function
3. Phenotype2GO mappings for Biological Process curation (both VariationPhenotype2GO and RNAiPhenotype2GO)
4. InterPro2GO mappings for sequence-based IEA annotations
5. Reference Genome Inferential Annotations
Contents
Manual curation
- Reference Genome (see also Reference Genome Inferential Annotations)
Semi-automated curation
- CCC - GO Cellular Component Curation using Textpresso
- MFC - GO Molecular Function Curation using Textpresso
Phenotype2GO pipeline
Reference Genome Inferential Annotations
Back to Caltech documentation
