Difference between revisions of "Entering WBG Articles"
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We would like to enter WBG articles to postgres as soon as they become available on line so they can be incorporated into WormBase as WBPapers. | We would like to enter WBG articles to postgres as soon as they become available on line so they can be incorporated into WormBase as WBPapers. | ||
| − | Here is a general file format for uploading to postgres, followed by a specific example. | + | Here is a general file format for uploading to postgres, followed by a specific example. |
| − | + | Note that for WBG articles, there are some values that do not change, e.g. Status (valid), Type (Gazette_article), Journal (Worm Breeder's Gazette), and Primary_data (not_designated). The identifiers are created according to the information in the volume, number, and page. | |
| − | + | Identifier wbg.nn.n.nnnn (where n = a number) | |
| − | + | Status Valid | |
| − | + | Title First letter capitalized | |
| − | + | Journal Worm Breeder's Gazette | |
| − | + | Volume nn (where n = a number) | |
| − | Affiliation | + | Year 20nn (where n = a number) |
| + | |||
| + | Month nn (where n = a number) | ||
| + | |||
| + | Page n or nn (where n = a number) | ||
| + | |||
| + | Author listed as Last Name, First Name//Last Name, First Name//Last Name, First Name etc. | ||
| + | |||
| + | Affiliation list all affiliations | ||
URL - corresponds to the URL of the article in the PDF document | URL - corresponds to the URL of the article in the PDF document | ||
| + | |||
| + | Type Gazette_article | ||
| + | |||
| + | Primary_data not_designated | ||
Revision as of 17:54, 13 January 2011
We would like to enter WBG articles to postgres as soon as they become available on line so they can be incorporated into WormBase as WBPapers.
Here is a general file format for uploading to postgres, followed by a specific example.
Note that for WBG articles, there are some values that do not change, e.g. Status (valid), Type (Gazette_article), Journal (Worm Breeder's Gazette), and Primary_data (not_designated). The identifiers are created according to the information in the volume, number, and page.
Identifier wbg.nn.n.nnnn (where n = a number)
Status Valid
Title First letter capitalized
Journal Worm Breeder's Gazette
Volume nn (where n = a number)
Year 20nn (where n = a number)
Month nn (where n = a number)
Page n or nn (where n = a number)
Author listed as Last Name, First Name//Last Name, First Name//Last Name, First Name etc.
Affiliation list all affiliations
URL - corresponds to the URL of the article in the PDF document
Type Gazette_article
Primary_data not_designated
A specific example with all information dispayed:
Identifier wbg18.2.0002
Status Valid
Title Antibiotic markers for rapid selection and easy maintenance of transgenic nematodes
Journal Worm Breeder's Gazette
Volume 18
Year 2010
Month 06
Page 2
Author Giordano-Santini, Rosina//Semple, Jennifer//Dupuy, Denis//Lehner, Ben
Affiliation Genome Regulation and Evolution, Inserm Unit 869, and Institut Europeen de Chimie et Biologie, Bordeaux, France
URL http://www.wormbook.org/wbg/volumes/volume-18-number-2/pdf/wbg-volume-18-number-2.02.pdf
Type Gazette_article
Primary_data not_designated
