Difference between revisions of "Dumping Script"

From WormBaseWiki
Jump to navigationJump to search
(New page: The dumping script will check for any dead gene IDs attached to papers and comment them out of the .ace file until they are fixed/deleted from postgres by a curator. The AQL query that fi...)
 
Line 1: Line 1:
 
The dumping script will check for any dead gene IDs attached to papers and comment them out of the .ace file until they are fixed/deleted from postgres by a curator.
 
The dumping script will check for any dead gene IDs attached to papers and comment them out of the .ace file until they are fixed/deleted from postgres by a curator.
 +
  
 
The AQL query that finds all dead genes in WB is:
 
The AQL query that finds all dead genes in WB is:
  
 
select all class gene where ->Species like "*elegans" and ->Status like "Dead"
 
select all class gene where ->Species like "*elegans" and ->Status like "Dead"
 +
 +
 +
Back to [[2010_-_Paper_Pipeline:_Documentation_and_Instructions]]

Revision as of 18:45, 8 April 2010

The dumping script will check for any dead gene IDs attached to papers and comment them out of the .ace file until they are fixed/deleted from postgres by a curator.


The AQL query that finds all dead genes in WB is:

select all class gene where ->Species like "*elegans" and ->Status like "Dead"


Back to 2010_-_Paper_Pipeline:_Documentation_and_Instructions