Difference between revisions of "DictyBase"
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==CCC for dicty Timeline - 2011== | ==CCC for dicty Timeline - 2011== | ||
| − | # Implement Textpresso 2.5 for dictyBase - Arun DONE | + | # [[Implement Textpresso 2.5 for dictyBase - Arun DONE]] |
| − | # | + | # [[Automating dicty literature upload - Arun, Petra, Sidd]] |
| − | # | + | # [[Clone CCC curation form for dictyBase - Juancarlos]] |
| − | # | + | # [[Test searches - from web site or by script? - Arun, Kimberly, Juancarlos]] |
| − | # | + | # [[dicty curation - Petra, Kimberly]] |
| − | # | + | # [[Output files - Petra, Kimberly, Sidd, Juancarlos]] |
==Previous Work - 2009/2010== | ==Previous Work - 2009/2010== | ||
Revision as of 17:24, 19 April 2011
CCC for dicty Timeline - 2011
Previous Work - 2009/2010
Proposed Curation Pipeline
- New papers are processed with an SVM developed for dicty cellular component curation
- Sentences from resulting positives (confidence level TBD) are subject to Textpresso category searches
- Positive sentences are presented to curators along with suggested GO terms and GO IDs
11/11/2009 Pascale, Petra finished uploading of dicty papers for Cellular Component SVM.
11/20/2009 Status of SVM?
11/20/2009 Categories on dicty site - two groups of CCC categories, remove Curator Specific categories?
04/07/2010 Awaiting analysis of dicty SVM - high confidence positives and checkFN file.
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