Difference between revisions of "2016 Advisory Board Meeting"
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* Text mining | * Text mining | ||
* SObA (Solr/Amigo/Cytoscape reuse) | * SObA (Solr/Amigo/Cytoscape reuse) |
Revision as of 09:46, 18 December 2015
The 2016 edition of the WormBase Scientific Advisory Board meeting will take place at Caltech on 4/5 Feb 2016.
Contents
Logistics
Attending
- Hinxton
- Paul Kersey, Matt Berriman, Kevin Howe, Bruce Bolt, Jane Lomax, Michael Paulini, Paul Davis, Gary Williams
- OICR
Accommodation
- Sarah Torres to arrange accommodation for non-locals
Travel
- Hinxton
- Will fly out on the 2/3 of Feb, and return on Sun 7th Feb (cheap flights)
- OICR
- Remote workers
- Mary Ann - arrive 2nd Feb (evening), leave 7th Feb (evening)
Advisors
- Jason Stajich
- Mike Cherry
- Brian Oliver
- Oliver Hobert
- A C. elegans geneticist
- A parasitologist
Project meeting
Scheduling
- All-hands project meeting, or smaller discussion groups?
- Before the SAB meeting or after?
- A pre-meeting would allow us to refine the agenda of the SAB (although perhaps too late for that)
- A post-meeting would allow us to set some goals based on comments/advise from the advisors
- Hinxton folks have more time after the meeting
Discussion topics
- Cross-site unification of documentation and code; what are our standards for documentation? For code?
- Organisation, display and querying of RNASeq data (c.f. FlyBase)
- Database migration
- What is the plan and timeline for incorporating the new database in the build? In curation workflows?
- WormBase / ParaSite integration + cross-resource tools (e.g. enrichment tool)
- Efficiency improvements
- Community curation (allele-phenotype, concise descriptions, etc.)
- Working with other MODs
- Text mining
- SObA (Solr/Amigo/Cytoscape reuse)
- Automated concise descriptions
- Micropublications
- Human disease / pathways
- Genomics
Agenda (preliminary)
Thu 4th Feb
- how we do on curation -beginning
- details on database migration
- plans for next year
- metrics