Pipeline for identifying papers with drugs
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- Initial plan was to use the 'molecules' list to identify papers with drugs, output was overloaded with papers with biomolecules, does not work for drugs.
- Building the drug lexicon:
The following lists were used:
- Antifungal agents: http://en.wikipedia.org/wiki/Antifungal_medication
- Antibiotics--antimicrobial, anti-fungal, anti-viral, anti-parasitic and anti-tumor agents:
http://antibiotics.toku-e.com/antimicrobial
- Antiparasitic drugs--Aldicarb, Ivermectin, Levamisole
- Anti-depressants, anti-depressants, anticonvulsants, anti-psychotic and psycho-active drugs:
http://en.wikipedia.org/wiki/List_of_antidepressants
http://en.wikipedia.org/wiki/Psychoactive_drug
(Table under the heading Affected neurotransmitter systems, capture columns 'Classification' and 'Examples')
- Anaesthics: http://en.wikipedia.org/wiki/Anesthetic
- Anticonvulsants--Ethosuximide, Arimethadione
- Alkaloid drugs: http://en.wikipedia.org/wiki/Alkaloid
- Immunosuppressants: http://en.wikipedia.org/wiki/Immunosuppressive_drug
http://www.surgeryencyclopedia.com/Fi-La/Immunosuppressant-Drugs.html
- Nutritional supplements: http://www.rxlist.com/supplements/alpha_a.htm
- For the purpose of the lexicon:Use generic name for drug name, trade name will be used as synonymn.
Exceptions: --Skip pure numbers Resveratrol, Gingko biloba