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Create the page "WormBase Model:Gene and Disease Ontology" on this wiki! See also the search results found.

• WormBase-Caltech Weekly Calls May 2011
  *Learning an ontology may be difficult, but she can stick to familiar material Ranjana - Preplanning WormBase side meetings at IWM?
  9 KB (1,302 words) - 16:38, 2 June 2011
• WormBase-Caltech Weekly Calls December 2012
  *Complex gene information will still be best handled manually *''Brugia malayi'' good starting point; Also, ''Pristionchus'' and ''C. briggsae''
  9 KB (1,339 words) - 19:02, 31 January 2013
• WormBase-Caltech Weekly Calls April 2014
  * Testing at juancarlos.wormbase.org (from there go to Tools > Ontology Browser) * As one-offs, Raymond can take newly generated GAFs from curators and process for testing.
  10 KB (1,474 words) - 15:54, 30 April 2014
• WormBase-Caltech Weekly Calls June 2012
  **Chris will add all model changes proposed for WS233 **?Interaction model "Rearrangement" tag needs an XREF and ?Rearrangement model needs an "Interactor" tag
  6 KB (983 words) - 18:02, 12 July 2012
• WormBase-Caltech Weekly Calls May 2017
  * GO-CAM (Gene Ontology - Causal Activity Model(ing)) ...rds, tool could pull up all relevant annotations to help start with GO CAM model building
  8 KB (1,229 words) - 15:31, 1 June 2017
• WS289
  New release of WormBase WS288 ...as built by Stavros Diamantakis with the input from the WormBase Community and Team. Thank you!
  16 KB (1,733 words) - 21:55, 11 May 2023
• WormBase-Caltech Weekly Calls March 2018
  * Kimberly and Wen reached out to organizers about WB presentation ** Want to indicate, for a query gene, genes for which multiple interaction types have been observed
  11 KB (1,703 words) - 15:27, 5 April 2018
• WormMine
  [http://intermine.wormbase.org/tools/wormmine/begin.do WormMine] [https://github.com/WormBase/intermine WormMine Github]
  15 KB (2,088 words) - 16:16, 15 October 2020
• WormBase-Caltech Weekly Calls April 2012
  *Curators can now edit links and add custom widgets ...a standards, how to educate users of database materials and how to use it (and think critically)
  7 KB (1,158 words) - 17:20, 3 May 2012
• WormBase-Caltech Weekly Calls March 2017
  * Now with more papers for positive and negative training set, shifting to SVM identification * Karen will need to become part time at WormBase (needs to be more than half time on SBIR)
  10 KB (1,527 words) - 15:32, 6 April 2017
• WS284
  New release of WormBase WS284 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES)
  17 KB (1,841 words) - 21:54, 11 May 2023
• WormBase-Caltech Weekly Calls January 2018
  === Strain data import to AGR for disease === * Will need to think about how genotypes are built and stored at other MODs
  12 KB (1,930 words) - 17:12, 1 February 2018
• WormBase-Caltech Weekly Calls January 2013
  *Trying to display site-of-action data on relevant gene pages ...announcement on the main WormBase page that WormMart will remain at WS220 and Intermine will replace it
  10 KB (1,553 words) - 18:04, 7 February 2013
• WormBase-Caltech Weekly Calls August 2012
  **Worm Phenotype ontology; attempt applying to other species? Some has been done already (e.g. C. bri **Anatomy ontology
  12 KB (1,878 words) - 15:55, 6 September 2012
• WormBase-Caltech Weekly Calls May 2018
  * Considering removing general terms in an ontology when more specific terms exist * Curators will send group Skype handle and requested time to talk
  14 KB (2,226 words) - 15:31, 7 June 2018
• Migration
  Tested by todd, gb1 and gb2 compliant, tested on freeze1 -rwxrwxr-x 1 todd wormbase 20053 Jul 6 14:06 cell.cgi
  16 KB (1,576 words) - 17:44, 16 August 2010
• WormBase-Caltech Weekly Calls March 2011
  *Need to coordinate with Juancarlos and Todd *Will need to be vigilant about checking for errors and inconsistencies before sending to Todd to put up on website
  13 KB (2,097 words) - 22:48, 7 April 2011
• WormBase-Caltech Weekly Calls June 2020
  * Can have maximum of 3 people in WormBase rooms at a time; probably best to only allow one person per WB room ...ampus, you need to take your temperature and assess your symptoms (if any) and submit info on form
  8 KB (1,228 words) - 20:57, 14 July 2020
• WS227
  New release of WormBase WS227 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  15 KB (1,738 words) - 11:20, 21 December 2011
• WS234
  New release of WormBase WS234 species/ DIR - contains a sub dir for each WormBase species (G_SPECIES) with the following files:
  15 KB (1,653 words) - 10:13, 18 January 2013

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