Difference between revisions of "WormBase-Caltech Weekly Calls"
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== January 14th, 2021 == | == January 14th, 2021 == | ||
− | === PubMed LinkOut to WormBase Paper Pages (Kimberly) === | + | ===PubMed LinkOut to WormBase Paper Pages (Kimberly) === |
* Other databases [https://www.ncbi.nlm.nih.gov/projects/linkout/doc/nonbiblinkout.html link out from PubMed] to their respective paper pages | * Other databases [https://www.ncbi.nlm.nih.gov/projects/linkout/doc/nonbiblinkout.html link out from PubMed] to their respective paper pages | ||
* For example, https://pubmed.ncbi.nlm.nih.gov/20864032/ links out to GO and MGI paper pages | * For example, https://pubmed.ncbi.nlm.nih.gov/20864032/ links out to GO and MGI paper pages | ||
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</pre> | </pre> | ||
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+ | ==Minutes== |
Revision as of 19:03, 14 January 2021
Contents
Previous Years
2021 Meetings
January 14th, 2021
PubMed LinkOut to WormBase Paper Pages (Kimberly)
- Other databases link out from PubMed to their respective paper pages
- For example, https://pubmed.ncbi.nlm.nih.gov/20864032/ links out to GO and MGI paper pages
- Would like to set this up for WormBase and ultimately for the Alliance, but this will require some developer help
- Work on this next month (after AFP and GO grant submissions)?
Update cycle for HGNC data in the OA (Ranjana)
- Juancarlos had these questions for us:
There's a script here that repopulates the postgres obo_*_hgnc tables based off of Chris and Wen's data /home/postgres/work/pgpopulation/obo_oa_ontologies/populate_obo_hgnc.pl It's not on a cronjob, because I think the files are not updated that often. Do we want to run this every night, or run it manually when the files get re-generated ? Or run every night, and check if the files's timestamps have changed, then repopulate postgres ?