Difference between revisions of "WormBase Model:Map"
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== Curator Comments/Description == | == Curator Comments/Description == | ||
− | + | Lots of unused tags, but acedb internal class. | |
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== Model == | == Model == | ||
<pre> | <pre> | ||
+ | //////////////////////// | ||
+ | // Basic map classes // | ||
+ | //////////////////////// | ||
+ | |||
+ | ?Map No_cache // Don't cache segs for this map. | ||
+ | Display Non_graphic // Prevents a graphic display! | ||
+ | Title UNIQUE ?Text | ||
+ | Flipped // Then coordinates go upwards | ||
+ | Unit UNIQUE Text | ||
+ | // e.g. kb, centiMorgan, MegaParsec | ||
+ | Centre UNIQUE Float UNIQUE Float | ||
+ | // default centre, width - else 0, 10 | ||
+ | Extent UNIQUE Float UNIQUE Float | ||
+ | // min, max - else min, max gene/locus | ||
+ | Default_view UNIQUE ?View | ||
+ | Minimal_view UNIQUE ?View // use this when >1 map displayed | ||
+ | View ?View // Columns to display | ||
+ | Inherits From_map UNIQUE ?Map // To locally edit | ||
+ | Author Text // login name of who created it | ||
+ | Main_Marker Main_Locus ?Gene // XREF Main_Marker removed to | ||
+ | // allow tag2 system | ||
+ | // tag2 system for items shown left of locator | ||
+ | Map ?Map XREF Map_shown #Map_position // Include all objects in these maps (must be mapped and have extents) | ||
+ | Includes ?Map | ||
+ | Contains Locus ?Locus XREF Map | ||
+ | Gene ?Gene XREF Map | ||
+ | Rearrangement ?Rearrangement XREF Map | ||
+ | Contig ?Contig XREF Map | ||
+ | Clone ?Clone XREF Map | ||
+ | Sequence ?Sequence XREF Map | ||
+ | Variation ?Variation XREF Map | ||
+ | Map_shown ?Map XREF Map | ||
+ | Transgene ?Transgene XREF Map //sdm added to display gmaps | ||
+ | // tag2 system for items shown in main region | ||
+ | EMBL_chromosome UNIQUE Text | ||
</pre> | </pre> | ||
== Proposed Changes == | == Proposed Changes == |
Latest revision as of 14:36, 4 October 2010
Curator Comments/Description
Lots of unused tags, but acedb internal class.
Model
//////////////////////// // Basic map classes // //////////////////////// ?Map No_cache // Don't cache segs for this map. Display Non_graphic // Prevents a graphic display! Title UNIQUE ?Text Flipped // Then coordinates go upwards Unit UNIQUE Text // e.g. kb, centiMorgan, MegaParsec Centre UNIQUE Float UNIQUE Float // default centre, width - else 0, 10 Extent UNIQUE Float UNIQUE Float // min, max - else min, max gene/locus Default_view UNIQUE ?View Minimal_view UNIQUE ?View // use this when >1 map displayed View ?View // Columns to display Inherits From_map UNIQUE ?Map // To locally edit Author Text // login name of who created it Main_Marker Main_Locus ?Gene // XREF Main_Marker removed to // allow tag2 system // tag2 system for items shown left of locator Map ?Map XREF Map_shown #Map_position // Include all objects in these maps (must be mapped and have extents) Includes ?Map Contains Locus ?Locus XREF Map Gene ?Gene XREF Map Rearrangement ?Rearrangement XREF Map Contig ?Contig XREF Map Clone ?Clone XREF Map Sequence ?Sequence XREF Map Variation ?Variation XREF Map Map_shown ?Map XREF Map Transgene ?Transgene XREF Map //sdm added to display gmaps // tag2 system for items shown in main region EMBL_chromosome UNIQUE Text