Difference between revisions of "WBConfCall 2022.08.04-Agenda and Minutes"
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* WormBase ParaSite: | * WormBase ParaSite: | ||
** Update Jbrowse to Jbrowse2 | ** Update Jbrowse to Jbrowse2 | ||
+ | ***Probably no rush but in the near future | ||
** WB pipeline/scripts to generate jbrowse intron tracks | ** WB pipeline/scripts to generate jbrowse intron tracks | ||
+ | ***Scott to point out scripts for processing intron RNASeq data: | ||
+ | ****https://github.com/WormBase/website-genome-browsers/blob/jbrowse-production/jbrowse/bin/low_scoring_introns.pl | ||
+ | ****https://github.com/WormBase/website-genome-browsers/blob/jbrowse-production/jbrowse/bin/med_hi_scoring_introns.pl | ||
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+ | GCB application https://docs.google.com/document/d/1juJ4mm1evay32lNt3OOsbKL36RY4_3cW/edit?pli=1# | ||
+ | Are we all happy we are on track? Any outstanding actions? | ||
+ | *Paul to complete by EOD Friday | ||
+ | |||
+ | |||
+ | WB22 grant application - Format and next steps? | ||
+ | *Use 2017 application as template. | ||
==Minutes== | ==Minutes== |
Latest revision as of 15:49, 4 August 2022
Help desk issues
- Definition of "outcross" #8713
- Looking for C. elegans S28 #8703
- Report of missing genes from VC2010 #8715
Hi, Are there any costs associated with depositing or accessing data in this repository? Especially for particularly large projects? Thank you, Brandon J. Wright, PhD Health Scientist Administrator (Program Officer) Office of Data Sharing CBIIT, OD, NCI, NIH 301-846-1693
Agenda
- WormBase ParaSite:
- Update Jbrowse to Jbrowse2
- Probably no rush but in the near future
- WB pipeline/scripts to generate jbrowse intron tracks
- Scott to point out scripts for processing intron RNASeq data:
- Update Jbrowse to Jbrowse2
GCB application https://docs.google.com/document/d/1juJ4mm1evay32lNt3OOsbKL36RY4_3cW/edit?pli=1# Are we all happy we are on track? Any outstanding actions?
- Paul to complete by EOD Friday
WB22 grant application - Format and next steps?
- Use 2017 application as template.