Difference between revisions of "WormBase SAB Meeting"

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California Institute of Technology, February 3-4, 2011
 
California Institute of Technology, February 3-4, 2011
  
[edit] Wednesday 21st May – Pre-meeting (WormBase staff only)
+
Wednesday 21st May – Pre-meeting (WormBase staff only)
  
 
6:30 – 18:00 Put right the World
 
6:30 – 18:00 Put right the World
[edit] Thursday 3rd May – Millikan Board Room
+
Thursday 3rd May – Millikan Board Room
  
 
BELOW IS 2008 SCHEDULE
 
BELOW IS 2008 SCHEDULE
[edit] 9:00 - 12:00:  
+
9:00 - 12:00:  
  
 
Website, UI, Build, Orthology
 
Website, UI, Build, Orthology
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     * Comparative Analysis:  (slides)
 
     * Comparative Analysis:  (slides)
 
     * modENCODE & Chado migration (slides)  
 
     * modENCODE & Chado migration (slides)  
 
+
    WormMart, wormMine
[edit] 13:00 – 15:30 Sequence curation and analysis, other nematodes
+
13:00 – 15:30 Sequence curation and analysis, other nematodes
  
 
     * Introduction: John Spieth (slides)
 
     * Introduction: John Spieth (slides)
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     * Future curation: Anthony Rogers (slides)
 
     * Future curation: Anthony Rogers (slides)
  
[edit] 15:30 - Literature Curation
+
15:30 - Literature Curation
  
     * Textpresso-based Curation: Kimberly Van Auken (slides)
+
     * New curation pipeline
 +
Microarray curation
 +
      Textpresso-based Curation: Kimberly Van Auken (slides)
 
     * Overview;Phenotype Curation: Gary Schindelman (slides)
 
     * Overview;Phenotype Curation: Gary Schindelman (slides)
 
     * Generalizing Phenote: Juancarlos Chan (slides)
 
     * Generalizing Phenote: Juancarlos Chan (slides)
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     * Gene Regulation: Xioadong Wang (slides)  
 
     * Gene Regulation: Xioadong Wang (slides)  
  
[edit] General Discussion
+
General Discussion
  
 
     * Coordination among sites
 
     * Coordination among sites
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     * Database migration community annotation  
 
     * Database migration community annotation  
  
[edit] Friday 23rd May
+
Friday 4th February
  
8:30 – 9:00 Advisors breakfast
+
8:00 – 9:00 Advisors breakfast
  
 
9:30 – 12:00 Advisors summary report
 
9:30 – 12:00 Advisors summary report
 
12:00 – 13:00 Lunch
 
 
13:00 – Discussion
 

Revision as of 01:11, 6 January 2011

2011 Scientific Advisory Board Meeting

California Institute of Technology, February 3-4, 2011

Wednesday 21st May – Pre-meeting (WormBase staff only)

6:30 – 18:00 Put right the World Thursday 3rd May – Millikan Board Room

BELOW IS 2008 SCHEDULE 9:00 - 12:00:

Website, UI, Build, Orthology

   * Introduction: Hinxton Reorganization Paul Sternberg 
   * New Website: Todd Harris (slides)
   * Genome Browser       (slides)
   * Build Process:  (slides)
   * Comparative Analysis:  (slides)
   * modENCODE & Chado migration (slides) 
   WormMart, wormMine

13:00 – 15:30 Sequence curation and analysis, other nematodes

   * Introduction: John Spieth (slides)
   * Curation Tool: Gary Williams (slides)
   * Current methods and metrics: Paul Davis (slides)
   * Briggsae curation and SNPS: Darin Blasiar (slides)
   * Future curation: Anthony Rogers (slides)

15:30 - Literature Curation

   * New curation pipeline 

Microarray curation

     Textpresso-based Curation: Kimberly Van Auken (slides)
   * Overview;Phenotype Curation: Gary Schindelman (slides)
   * Generalizing Phenote: Juancarlos Chan (slides)
   * Genetics: Mary Ann Tuli (slides)
   * Cell-centric curation: Raymond Lee (slides)
   * Gene Regulation: Xioadong Wang (slides) 

General Discussion

   * Coordination among sites
   * Quality control
   * Outreach
   * Database migration community annotation 

Friday 4th February

8:00 – 9:00 Advisors breakfast

9:30 – 12:00 Advisors summary report