WormBase Models

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The A - Z of WormBase Models

Sanger CVS models.wrm

No. Class Institute Comment/Brief Description Curator(s)
1 WormBase Model:?2_point_data Sanger ?
2 WormBase Model:?3d_data ? ?
3 WormBase Model:?Accession_number Sanger ?
4 WormBase Model:?Analysis ? This class is used along with ?Condition to store meta data about an experiment
5 WormBase Model:?Anatomy_function Caltech ?
6 WormBase Model:?Anatomy_name Caltech ?
7 WormBase Model:?Anatomy_term Caltech ?
8 WormBase Model:?Antibody Caltech ?
9 WormBase Model:?AO_code ? ?
10 WormBase Model:?Atlas Ocir WORMBASE ATLAS (VIRTUAL WORM)
11 WormBase Model:?Author Caltech ?
12 WormBase Model:?Balancer ? ?
13 WormBase Model:?CDS Sanger ? Paul Davis + others
14 WormBase Model:?Cell Sanger/Caltech? ?
15 WormBase Model:?Cell_group Sanger/Caltech? ?
16 WormBase Model:?Clone Sanger ?
17 WormBase Model:?Condition ? ?
18 WormBase Model:?Contig Sanger ?
19 WormBase Model:?Database Sanger ?
20 WormBase Model:?Database_field Sanger ?
21 WormBase Model:?Expression_cluster Caltech ?
22 WormBase Model:?Expr_pattern Caltech ?
23 WormBase Model:?Expr_profile Caltech ?
24 WormBase Model:?Feature Sanger ? Paul Davis Mary Anne
25 WormBase Model:?Feature_data Sanger ?Class of data used to mark up features on Transcript data
26 WormBase Model:?Gene Sanger Envelope for collecting/connecting data pertaining to a single gene Mary Ann
27 WormBase Model:?Gene_class Sanger Used for describing and grouping a family of genes Mary Ann
28 WormBase Model:?Gene_cluster Sanger Used to denote a cluster of genes of a specific type - not maintained?
29 WormBase Model:?Gene_name Sanger ?
30 WormBase Model:?Gene_regulation Caltech ?
31 WormBase Model:?Genetic_code Sanger Allows for alternate genetic codes for Mitocondria and selenocysteine.
32 WormBase Model:?GO_code Caltech ?
33 WormBase Model:?GO_term Caltech ?
34 WormBase Model:?Grid Sanger ?
35 WormBase Model:?Grid_data Sanger ?
36 WormBase Model:?Grid_row Sanger ?
37 WormBase Model:?Homol_data Sanger Used for storing alignment data
38 WormBase Model:?Homology_group Caltech ?
39 WormBase Model:?Interaction Caltech ?
40 WormBase Model:?Interval_col_conf ? ?
41 WormBase Model:?Jade Acedb? ?
42 WormBase Model:?Lab_Location Caltech ?
43 WormBase Model:?Laboratory Caltech ?
44 WormBase Model:?Library Sanger libraries used for sequencing of nematode ESTs // Information to come from Mark Blaxters
45 WormBase Model:?Life_stage Caltech ?
46 WormBase Model:?Locus Sanger This class is a reminent that should be cleaned up.
47 WormBase Model:?ManyMap Sanger ?
48 WormBase Model:?Map Sanger ?
49 WormBase Model:?Map_error Sanger ?
50 WormBase Model:?Map_offset Sanger ?
51 WormBase Model:?Map_position Sanger ?
52 WormBase Model:?Mass_spec_experiment Sanger ? Gary Williams
53 WormBase Model:?Mass_spec_peptide Sanger ? Gary Williams
54 WormBase Model:?Method ? AceDB class that details display etc. of objects in the other classes
55 WormBase Model:?Microarray Caltech ?
56 WormBase Model:?Microarray_experiment Caltech ?
57 WormBase Model:?Microarray_results Caltech ?
58 WormBase Model:?Mixed_grid_row Sanger ?
59 WormBase Model:?Molecule Caltech ?
60 WormBase Model:?Motif Sanger ?
61 WormBase Model:?Movie Caltech ?
62 WormBase Model:?Multi_counts Sanger? ?
63 WormBase Model:?MultiMap ? Not used?
64 WormBase Model:?Multi_pt_data Sanger ?
65 WormBase Model:?Neurodata ? ?Not Used
66 WormBase Model:?Neuro_location ? ? Not Used
67 WormBase Model:?Oligo ? ?
68 WormBase Model:?Oligo_set ? ?
69 WormBase Model:?Operon Sanger Stores genes that are in Operons Paul Davis
70 WormBase Model:?Paper Caltech ?
71 WormBase Model:?PCR_product ? ?
72 WormBase Model:?Person Caltech ?
73 WormBase Model:?Person_name Caltech ?
74 WormBase Model:?Phenotype Caltech ?
75 WormBase Model:?Phenotype_Assay Caltech ?
76 WormBase Model:?Phenotype_name Caltech ?
77 WormBase Model:?Picture Caltech ?
78 WormBase Model:?Position_Matrix Caltech ?
79 WormBase Model:?Pos_neg_data Sanger ?
80 WormBase Model:?Protein Sanger ?
81 WormBase Model:?Pseudogene Sanger Stores the Pseudogene models
82 WormBase Model:?Rearrangement Caltech ?
83 WormBase Model:?ReconCellInfo Ocir ?
84 WormBase Model:?Reconstruction Ocir ?
85 WormBase Model:?Reference Caltech ?
86 WormBase Model:?RNAi Caltech ?
87 WormBase Model:?SAGE_experiment Sanger ?
88 WormBase Model:?SAGE_tag Sanger ?
89 WormBase Model:?Sequence Sanger A broad class for storing genomic, Transcripts Sequence etc.
90 WormBase Model:?SK_map Caltech ?
91 WormBase Model:?SO_term Caltech ?
92 WormBase Model:?Species Sanger ?
93 WormBase Model:?Strain Sanger ?
94 WormBase Model:?Structure_data Ocir ?
95 WormBase Model:?Timepoint Ocir ?
96 WormBase Model:?Transcript Sanger Stores RNAgenes and the Full length Coding_transcripts
97 WormBase Model:?Transgene Caltech ?
98 WormBase Model:?Transposon Sanger Stores the Transposon span and S_child info Paul Davis
99 WormBase Model:?Transposon_family Sanger Used for grouping like ?Transposons Paul Davis
100 WormBase Model:?Variation Sanger ? Mary Ann
101 WormBase Model:?Variation_name Sanger ?
102 WormBase Model:?YH Caltech ?