No.
|
Class
|
Institute
|
Comment/Brief Description
|
Curator(s)
|
1
|
WormBase Model:?2_point_data
|
Sanger
|
?
|
|
2
|
WormBase Model:?3d_data
|
?
|
?
|
|
3
|
WormBase Model:?Accession_number
|
Sanger
|
?
|
|
4
|
WormBase Model:?Analysis
|
?
|
This class is used along with ?Condition to store meta data about an experiment
|
|
5
|
WormBase Model:?Anatomy_function
|
Caltech
|
?
|
|
6
|
WormBase Model:?Anatomy_name
|
Caltech
|
?
|
|
7
|
WormBase Model:?Anatomy_term
|
Caltech
|
?
|
|
8
|
WormBase Model:?Antibody
|
Caltech
|
?
|
|
9
|
WormBase Model:?AO_code
|
?
|
?
|
|
10
|
WormBase Model:?Atlas
|
Ocir
|
WORMBASE ATLAS (VIRTUAL WORM)
|
|
11
|
WormBase Model:?Author
|
Caltech
|
?
|
|
12
|
WormBase Model:?Balancer
|
?
|
?
|
|
13
|
WormBase Model:?CDS
|
Sanger
|
?
|
Paul Davis + others
|
14
|
WormBase Model:?Cell
|
Sanger/Caltech?
|
?
|
|
15
|
WormBase Model:?Cell_group
|
Sanger/Caltech?
|
?
|
|
16
|
WormBase Model:?Clone
|
Sanger
|
?
|
|
17
|
WormBase Model:?Condition
|
?
|
?
|
|
18
|
WormBase Model:?Contig
|
Sanger
|
?
|
|
19
|
WormBase Model:?Database
|
Sanger
|
?
|
|
20
|
WormBase Model:?Database_field
|
Sanger
|
?
|
|
21
|
WormBase Model:?Expression_cluster
|
Caltech
|
?
|
|
22
|
WormBase Model:?Expr_pattern
|
Caltech
|
?
|
|
23
|
WormBase Model:?Expr_profile
|
Caltech
|
?
|
|
24
|
WormBase Model:?Feature
|
Sanger
|
?
|
Paul Davis Mary Anne
|
25
|
WormBase Model:?Feature_data
|
Sanger
|
?Class of data used to mark up features on Transcript data
|
|
26
|
WormBase Model:?Gene
|
Sanger
|
Envelope for collecting/connecting data pertaining to a single gene
|
|
27
|
WormBase Model:?Gene_class
|
Sanger
|
Used for describing and grouping a family of genes
|
|
28
|
WormBase Model:?Gene_cluster
|
Sanger
|
Used to denote a cluster of genes of a specific type - not maintained?
|
|
29
|
WormBase Model:?Gene_name
|
Sanger
|
?
|
|
30
|
WormBase Model:?Gene_regulation
|
Caltech
|
?
|
|
31
|
WormBase Model:?Genetic_code
|
Sanger
|
Allows for alternate genetic codes for Mitocondria and selenocysteine.
|
|
32
|
WormBase Model:?GO_code
|
Caltech
|
?
|
|
33
|
WormBase Model:?GO_term
|
Caltech
|
?
|
|
34
|
WormBase Model:?Grid
|
Sanger
|
?
|
|
35
|
WormBase Model:?Grid_data
|
Sanger
|
?
|
|
36
|
WormBase Model:?Grid_row
|
Sanger
|
?
|
|
37
|
WormBase Model:?Homol_data
|
Sanger
|
Used for storing alignment data
|
|
38
|
WormBase Model:?Homology_group
|
Caltech
|
?
|
|
39
|
WormBase Model:?Interaction
|
Caltech
|
?
|
|
40
|
WormBase Model:?Interval_col_conf
|
?
|
?
|
|
41
|
WormBase Model:?Jade
|
Acedb?
|
?
|
|
42
|
WormBase Model:?Lab_Location
|
Caltech
|
?
|
|
43
|
WormBase Model:?Laboratory
|
Caltech
|
?
|
|
44
|
WormBase Model:?Library
|
Sanger
|
libraries used for sequencing of nematode ESTs // Information to come from Mark Blaxters
|
|
45
|
WormBase Model:?Life_stage
|
Caltech
|
?
|
|
46
|
WormBase Model:?Locus
|
Sanger
|
This class is a reminent that should be cleaned up.
|
|
47
|
WormBase Model:?ManyMap
|
Sanger
|
?
|
|
48
|
WormBase Model:?Map
|
Sanger
|
?
|
|
49
|
WormBase Model:?Map_error
|
Sanger
|
?
|
|
50
|
WormBase Model:?Map_offset
|
Sanger
|
?
|
|
51
|
WormBase Model:?Map_position
|
Sanger
|
?
|
|
52
|
WormBase Model:?Mass_spec_experiment
|
Sanger
|
?
|
|
53
|
WormBase Model:?Mass_spec_peptide
|
Sanger
|
?
|
|
54
|
WormBase Model:?Method
|
?
|
AceDB class that details display etc. of objects in the other classes
|
|
55
|
WormBase Model:?Microarray
|
Caltech
|
?
|
|
56
|
WormBase Model:?Microarray_experiment
|
Caltech
|
?
|
|
57
|
WormBase Model:?Microarray_results
|
Caltech
|
?
|
|
58
|
WormBase Model:?Mixed_grid_row
|
Sanger
|
?
|
|
59
|
WormBase Model:?Molecule
|
Caltech
|
?
|
|
60
|
WormBase Model:?Motif
|
Sanger
|
?
|
|
61
|
WormBase Model:?Movie
|
Caltech
|
?
|
|
62
|
WormBase Model:?Multi_counts
|
Sanger?
|
?
|
|
63
|
WormBase Model:?MultiMap
|
?
|
Not used?
|
|
64
|
WormBase Model:?Multi_pt_data
|
Sanger
|
?
|
|
65
|
WormBase Model:?Neurodata
|
?
|
?Not Used
|
|
66
|
WormBase Model:?Neuro_location
|
?
|
? Not Used
|
|
67
|
WormBase Model:?Oligo
|
?
|
?
|
|
68
|
WormBase Model:?Oligo_set
|
?
|
?
|
|
69
|
WormBase Model:?Operon
|
Sanger
|
Stores genes that are in Operons
|
Paul Davis
|
70
|
WormBase Model:?Paper
|
Caltech
|
?
|
|
71
|
WormBase Model:?PCR_product
|
?
|
?
|
|
72
|
WormBase Model:?Person
|
Caltech
|
?
|
|
73
|
WormBase Model:?Person_name
|
Caltech
|
?
|
|
74
|
WormBase Model:?Phenotype
|
Caltech
|
?
|
|
75
|
WormBase Model:?Phenotype_Assay
|
Caltech
|
?
|
|
76
|
WormBase Model:?Phenotype_name
|
Caltech
|
?
|
|
77
|
WormBase Model:?Picture
|
Caltech
|
?
|
|
78
|
WormBase Model:?Position_Matrix
|
Caltech
|
?
|
|
79
|
WormBase Model:?Pos_neg_data
|
Sanger
|
?
|
|
80
|
WormBase Model:?Protein
|
Sanger
|
?
|
|
81
|
WormBase Model:?Pseudogene
|
Sanger
|
Stores the Pseudogene models
|
|
82
|
WormBase Model:?Rearrangement
|
Caltech
|
?
|
|
83
|
WormBase Model:?ReconCellInfo
|
Ocir
|
?
|
|
84
|
WormBase Model:?Reconstruction
|
Ocir
|
?
|
|
85
|
WormBase Model:?Reference
|
Caltech
|
?
|
|
86
|
WormBase Model:?RNAi
|
Caltech
|
?
|
|
87
|
WormBase Model:?SAGE_experiment
|
Sanger
|
?
|
|
88
|
WormBase Model:?SAGE_tag
|
Sanger
|
?
|
|
89
|
WormBase Model:?Sequence
|
Sanger
|
A broad class for storing genomic, Transcripts Sequence etc.
|
|
90
|
WormBase Model:?SK_map
|
Caltech
|
?
|
|
91
|
WormBase Model:?SO_term
|
Caltech
|
?
|
|
92
|
WormBase Model:?Species
|
Sanger
|
?
|
|
93
|
WormBase Model:?Strain
|
Sanger
|
?
|
|
94
|
WormBase Model:?Structure_data
|
Ocir
|
?
|
|
95
|
WormBase Model:?Timepoint
|
Ocir
|
?
|
|
96
|
WormBase Model:?Transcript
|
Sanger
|
Stores RNAgenes and the Full length Coding_transcripts
|
|
97
|
WormBase Model:?Transgene
|
Caltech
|
?
|
|
98
|
WormBase Model:?Transposon
|
Sanger
|
Stores the Transposon span and S_child info
|
Paul Davis
|
99
|
WormBase Model:?Transposon_family
|
Sanger
|
Used for grouping like ?Transposons
|
Paul Davis
|
100
|
WormBase Model:?Variation
|
Sanger
|
?
|
Mary Ann
|
101
|
WormBase Model:?Variation_name
|
Sanger
|
?
|
|
102
|
WormBase Model:?YH
|
Caltech
|
?
|
|