Difference between revisions of "WormBase Models"

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(Created page with '== The A - Z of WormBase Models == [http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup Sanger CVS models.wrm] [[WormBase Model:?2_poi…')
 
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[http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup Sanger CVS models.wrm]
 
[http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/wormbase/wspec/models.wrm?root=ensembl&view=markup Sanger CVS models.wrm]
  
−
[[WormBase Model:?2_point_data]] - Sanger
+
{| border="1" class="wikitable"
−
 
+
|-
−
[[WormBase Model:?3d_data]]
+
! No.
−
 
+
! Class
−
[[WormBase Model:?Accession_number]] - Sanger
+
! Institute
−
 
+
! Comment/Brief Description
−
[[WormBase Model:?Analysis]] - This class is used along with ?Condition to store meta data about an experiment  
+
! Curator(s)
−
 
+
|-
−
[[WormBase Model:?Anatomy_function]] - Caltech
+
| 1
−
 
+
|[[WormBase Model:?2_point_data]]
−
[[WormBase Model:?Anatomy_name]] - Caltech
+
|Sanger
−
 
+
| ?
−
[[WormBase Model:?Anatomy_term]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Antibody]] - Caltech
+
| 2
−
 
+
| [[WormBase Model:?3d_data]]
−
[[WormBase Model:?AO_code]]
+
| ?
−
 
+
| ?
−
[[WormBase Model:?Atlas]] - WORMBASE ATLAS (VIRTUAL WORM) - Ocir
+
|
−
 
+
|-
−
[[WormBase Model:?Author]] - Caltech
+
| 3
−
 
+
|[[WormBase Model:?Accession_number]]
−
[[WormBase Model:?Balancer]]
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?CDS]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Cell]] - Sanger/Caltech?
+
| 4
−
 
+
| [[WormBase Model:?Analysis]]
−
[[WormBase Model:?Cell_group]] - Sanger/Caltech?
+
| ?
−
 
+
| This class is used along with ?Condition to store meta data about an experiment  
−
[[WormBase Model:?Clone]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Condition]]
+
| 5
−
 
+
| [[WormBase Model:?Anatomy_function]]
−
[[WormBase Model:?Contig]] - Sanger
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Database]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Database_field]] - Sanger
+
| 6
−
 
+
| [[WormBase Model:?Anatomy_name]]
−
[[WormBase Model:?Expression_cluster]] - Caltech
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Expr_pattern]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Expr_profile]] - Caltech
+
| 7
−
 
+
| [[WormBase Model:?Anatomy_term]]
−
[[WormBase Model:?Feature]] - Sanger
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Feature_data]] - Sanger, Class of data used to mark up features on Transcript data
+
|
−
 
+
|-
−
[[WormBase Model:?Gene]] - Sanger - Envelope for collecting/connecting data pertaining to a single gene
+
| 8
−
 
+
| [[WormBase Model:?Antibody]]
−
[[WormBase Model:?Gene_class]] - Sanger - Used for describing and grouping a family of genes
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Gene_cluster]] - Sanger - Used to denote a cluster of genes of a specific type - not maintained?
+
|
−
 
+
|-
−
[[WormBase Model:?Gene_name]] - Sanger
+
| 9
−
 
+
| [[WormBase Model:?AO_code]]
−
[[WormBase Model:?Gene_regulation]] - Caltech
+
| ?
−
 
+
| ?
−
[[WormBase Model:?Genetic_code]] - Sanger - Allows for alternate genetic codes for Mitocondria and selenocysteine.
+
|
−
 
+
|-
−
[[WormBase Model:?GO_code]] - Caltech
+
| 10
−
 
+
| [[WormBase Model:?Atlas]]
−
[[WormBase Model:?GO_term]] - Caltech
+
| Ocir
−
 
+
| WORMBASE ATLAS (VIRTUAL WORM)
−
[[WormBase Model:?Grid]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Grid_data]] - Sanger
+
| 11
−
 
+
| [[WormBase Model:?Author]]
−
[[WormBase Model:?Grid_row]] - Sanger
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Homol_data]] - Sanger - Used for storing alignment data
+
|
−
 
+
|-
−
[[WormBase Model:?Homology_group]] - Caltech
+
| 12
−
 
+
| [[WormBase Model:?Balancer]]
−
[[WormBase Model:?Interaction]] - Caltech
+
| ?
−
 
+
| ?
−
[[WormBase Model:?Interval_col_conf]] - ?
+
|
−
 
+
|-
−
[[WormBase Model:?Jade]] - Acedb?
+
| 13
−
 
+
| [[WormBase Model:?CDS]]
−
[[WormBase Model:?Lab_Location]] - Caltech  
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?Laboratory]] - Caltech
+
| [[User:Pdavis|Paul Davis]] + others
−
 
+
|-
−
[[WormBase Model:?Library]] - Sanger - libraries used for sequencing of nematode ESTs // Information to come from Mark Blaxters
+
| 14
−
 
+
| [[WormBase Model:?Cell]]
−
[[WormBase Model:?Life_stage]] - Caltech
+
| Sanger/Caltech?
−
 
+
| ?
−
[[WormBase Model:?Locus]] - Sanger - This class is a reminent that should be cleaned up.
+
|
−
 
+
|-
−
[[WormBase Model:?ManyMap]] - Sanger
+
| 15
−
 
+
| [[WormBase Model:?Cell_group]]
−
[[WormBase Model:?Map]] - Sanger
+
| Sanger/Caltech?
−
 
+
| ?
−
[[WormBase Model:?Map_error]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Map_offset]] - Sanger
+
| 16
−
 
+
| [[WormBase Model:?Clone]]
−
[[WormBase Model:?Map_position]] - Sanger
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?Mass_spec_experiment]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Mass_spec_peptide]] - Sanger
+
| 17
−
 
+
| [[WormBase Model:?Condition]]
−
[[WormBase Model:?Method]] - AceDB class that details display etc. of objects in the other classes
+
| ?
−
 
+
| ?
−
[[WormBase Model:?Microarray]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Microarray_experiment]] - Caltech
+
| 18
−
 
+
| [[WormBase Model:?Contig]]
−
[[WormBase Model:?Microarray_results]] - Caltech
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?Mixed_grid_row]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Molecule]] - Caltech
+
| 19
−
 
+
| [[WormBase Model:?Database]]
−
[[WormBase Model:?Motif]] - Sanger
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?Movie]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Multi_counts]] - Sanger?
+
| 20
−
 
+
| [[WormBase Model:?Database_field]]
−
[[WormBase Model:?MultiMap]] - ? Not used?
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?Multi_pt_data]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Neurodata]] - ? Not Used
+
| 21
−
 
+
| [[WormBase Model:?Expression_cluster]]
−
[[WormBase Model:?Neuro_location]] - ? Not Used
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Oligo]]
+
|
−
 
+
|-
−
[[WormBase Model:?Oligo_set]]
+
| 22
−
 
+
| [[WormBase Model:?Expr_pattern]]
−
[[WormBase Model:?Operon]] - Sanger - Stores genes that are in Operons
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Paper]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?PCR_product]]
+
| 23
−
 
+
| [[WormBase Model:?Expr_profile]]
−
[[WormBase Model:?Person]] - Caltech
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Person_name]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Phenotype]] - Caltech
+
| 24
−
 
+
| [[WormBase Model:?Feature]]
−
[[WormBase Model:?Phenotype_Assay]] - Caltech
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?Phenotype_name]] - Caltech
+
| [[User:Pdavis|Paul Davis]] Mary Anne
−
 
+
|-
−
[[WormBase Model:?Picture]] - Caltech
+
| 25
−
 
+
| [[WormBase Model:?Feature_data]]
−
[[WormBase Model:?Position_Matrix]] - Caltech
+
| Sanger
−
 
+
| ?Class of data used to mark up features on Transcript data
−
[[WormBase Model:?Pos_neg_data]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Protein]] - Sanger
+
| 26
−
 
+
| [[WormBase Model:?Gene]]
−
[[WormBase Model:?Pseudogene]] - Sanger - Stores the Pseudogene models
+
| Sanger
−
 
+
| Envelope for collecting/connecting data pertaining to a single gene
−
[[WormBase Model:?Rearrangement]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?ReconCellInfo]] - Ocir
+
| 27
−
 
+
| [[WormBase Model:?Gene_class]]
−
[[WormBase Model:?Reconstruction]] - Ocir
+
| Sanger
−
 
+
| Used for describing and grouping a family of genes
−
[[WormBase Model:?Reference]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?RNAi]] - Caltech
+
| 28
−
 
+
| [[WormBase Model:?Gene_cluster]]
−
[[WormBase Model:?SAGE_experiment]] - Sanger
+
| Sanger
−
 
+
| Used to denote a cluster of genes of a specific type - not maintained?
−
[[WormBase Model:?SAGE_tag]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Sequence]] - Sanger - A broad class for storing genomic, Transcripts Sequence etc.  
+
| 29
−
 
+
| [[WormBase Model:?Gene_name]]
−
[[WormBase Model:?SK_map]] - Caltech
+
| Sanger
−
 
+
| ?
−
[[WormBase Model:?SO_term]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Species]] - Sanger
+
| 30
−
 
+
| [[WormBase Model:?Gene_regulation]]
−
[[WormBase Model:?Strain]] - Sanger
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Structure_data]] - Ocir
+
|
−
 
+
|-
−
[[WormBase Model:?Timepoint]] - Ocir
+
| 31
−
 
+
| [[WormBase Model:?Genetic_code]]
−
[[WormBase Model:?Transcript]] - Sanger - Stores RNAgenes and the Full length Coding_transcripts
+
| Sanger
−
 
+
| Allows for alternate genetic codes for Mitocondria and selenocysteine.
−
[[WormBase Model:?Transgene]] - Caltech
+
|
−
 
+
|-
−
[[WormBase Model:?Transposon]] - Sanger - Stores the Transposon span and S_child info
+
| 32
−
 
+
| [[WormBase Model:?GO_code]]
−
[[WormBase Model:?Transposon_family]] - Sanger - Used for grouping like ?Transposons
+
| Caltech
−
 
+
| ?
−
[[WormBase Model:?Variation]] - Sanger
+
|
−
 
+
|-
−
[[WormBase Model:?Variation_name]] - Sanger
+
| 33
−
 
+
| [[WormBase Model:?GO_term]]
−
[[WormBase Model:?YH]] - Caltech
+
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 34
 +
| [[WormBase Model:?Grid]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 35
 +
| [[WormBase Model:?Grid_data]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 36
 +
| [[WormBase Model:?Grid_row]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 37
 +
| [[WormBase Model:?Homol_data]]
 +
| Sanger
 +
| Used for storing alignment data
 +
|
 +
|-
 +
| 38
 +
| [[WormBase Model:?Homology_group]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 39
 +
| [[WormBase Model:?Interaction]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 40
 +
| [[WormBase Model:?Interval_col_conf]]
 +
| ?
 +
| ?
 +
|
 +
|-
 +
| 41
 +
| [[WormBase Model:?Jade]]
 +
| Acedb?
 +
| ?
 +
|
 +
|-
 +
| 42
 +
| [[WormBase Model:?Lab_Location]]
 +
| Caltech  
 +
| ?
 +
|
 +
|-
 +
| 43
 +
| [[WormBase Model:?Laboratory]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 44
 +
| [[WormBase Model:?Library]]
 +
| Sanger
 +
| libraries used for sequencing of nematode ESTs // Information to come from Mark Blaxters
 +
|
 +
|-
 +
| 45
 +
| [[WormBase Model:?Life_stage]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 46
 +
| [[WormBase Model:?Locus]]
 +
| Sanger
 +
| This class is a reminent that should be cleaned up.
 +
|
 +
|-
 +
| 47
 +
| [[WormBase Model:?ManyMap]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 48
 +
| [[WormBase Model:?Map]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 49
 +
| [[WormBase Model:?Map_error]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 50
 +
| [[WormBase Model:?Map_offset]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 51
 +
| [[WormBase Model:?Map_position]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 52
 +
| [[WormBase Model:?Mass_spec_experiment]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 53
 +
| [[WormBase Model:?Mass_spec_peptide]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 54
 +
| [[WormBase Model:?Method]]
 +
| ?
 +
| AceDB class that details display etc. of objects in the other classes
 +
|
 +
|-
 +
| 55
 +
| [[WormBase Model:?Microarray]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 56
 +
| [[WormBase Model:?Microarray_experiment]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 57
 +
| [[WormBase Model:?Microarray_results]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 58
 +
| [[WormBase Model:?Mixed_grid_row]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 59
 +
| [[WormBase Model:?Molecule]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 60
 +
| [[WormBase Model:?Motif]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 61
 +
| [[WormBase Model:?Movie]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 62
 +
| [[WormBase Model:?Multi_counts]]
 +
| Sanger?
 +
| ?
 +
|
 +
|-
 +
| 63
 +
| [[WormBase Model:?MultiMap]]
 +
| ?
 +
| Not used?
 +
|
 +
|-
 +
| 64
 +
| [[WormBase Model:?Multi_pt_data]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 65
 +
| [[WormBase Model:?Neurodata]]
 +
| ?
 +
| ?Not Used
 +
|
 +
|-
 +
| 66
 +
| [[WormBase Model:?Neuro_location]]
 +
| ?
 +
| ? Not Used
 +
|
 +
|-
 +
| 67
 +
| [[WormBase Model:?Oligo]]
 +
| ?
 +
| ?
 +
|
 +
|-
 +
| 68
 +
| [[WormBase Model:?Oligo_set]]
 +
| ?
 +
| ?
 +
|
 +
|-
 +
| 69
 +
| [[WormBase Model:?Operon]]
 +
| Sanger
 +
| Stores genes that are in Operons
 +
| [[User:Pdavis|Paul Davis]]
 +
|-
 +
| 70
 +
| [[WormBase Model:?Paper]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 71
 +
| [[WormBase Model:?PCR_product]]
 +
| ?
 +
| ?
 +
|
 +
|-
 +
| 72
 +
| [[WormBase Model:?Person]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 73
 +
| [[WormBase Model:?Person_name]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 74
 +
| [[WormBase Model:?Phenotype]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 75
 +
| [[WormBase Model:?Phenotype_Assay]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 76
 +
| [[WormBase Model:?Phenotype_name]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 77
 +
| [[WormBase Model:?Picture]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 78
 +
| [[WormBase Model:?Position_Matrix]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 79
 +
| [[WormBase Model:?Pos_neg_data]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 80
 +
| [[WormBase Model:?Protein]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 81
 +
| [[WormBase Model:?Pseudogene]]
 +
| Sanger
 +
| Stores the Pseudogene models
 +
|
 +
|-
 +
| 82
 +
| [[WormBase Model:?Rearrangement]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 83
 +
| [[WormBase Model:?ReconCellInfo]]
 +
| Ocir
 +
| ?
 +
|
 +
|-
 +
| 84
 +
| [[WormBase Model:?Reconstruction]]
 +
| Ocir
 +
| ?
 +
|
 +
|-
 +
| 85
 +
| [[WormBase Model:?Reference]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 86
 +
| [[WormBase Model:?RNAi]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 87
 +
| [[WormBase Model:?SAGE_experiment]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 88
 +
| [[WormBase Model:?SAGE_tag]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 89
 +
| [[WormBase Model:?Sequence]]
 +
| Sanger
 +
| A broad class for storing genomic, Transcripts Sequence etc.  
 +
|
 +
|-
 +
| 90
 +
| [[WormBase Model:?SK_map]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 91
 +
| [[WormBase Model:?SO_term]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 92
 +
| [[WormBase Model:?Species]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 93
 +
| [[WormBase Model:?Strain]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 94
 +
| [[WormBase Model:?Structure_data]]
 +
| Ocir
 +
| ?
 +
|
 +
|-
 +
| 95
 +
| [[WormBase Model:?Timepoint]]
 +
| Ocir
 +
| ?
 +
|
 +
|-
 +
| 96
 +
| [[WormBase Model:?Transcript]]
 +
| Sanger
 +
| Stores RNAgenes and the Full length Coding_transcripts
 +
|
 +
|-
 +
| 97
 +
| [[WormBase Model:?Transgene]]
 +
| Caltech
 +
| ?
 +
|
 +
|-
 +
| 98
 +
| [[WormBase Model:?Transposon]]
 +
| Sanger
 +
| Stores the Transposon span and S_child info
 +
| [[User:Pdavis|Paul Davis]]
 +
|-
 +
| 99
 +
| [[WormBase Model:?Transposon_family]]
 +
| Sanger
 +
| Used for grouping like ?Transposons
 +
| [[User:Pdavis|Paul Davis]]
 +
|-
 +
| 100
 +
| [[WormBase Model:?Variation]]
 +
| Sanger
 +
| ?
 +
| Mary Ann
 +
|-
 +
| 101
 +
| [[WormBase Model:?Variation_name]]
 +
| Sanger
 +
| ?
 +
|
 +
|-
 +
| 102
 +
| [[WormBase Model:?YH]]
 +
| Caltech
 +
| ?
 +
|}

Revision as of 10:44, 5 July 2010

The A - Z of WormBase Models

Sanger CVS models.wrm

No. Class Institute Comment/Brief Description Curator(s)
1 WormBase Model:?2_point_data Sanger ?
2 WormBase Model:?3d_data ? ?
3 WormBase Model:?Accession_number Sanger ?
4 WormBase Model:?Analysis ? This class is used along with ?Condition to store meta data about an experiment
5 WormBase Model:?Anatomy_function Caltech ?
6 WormBase Model:?Anatomy_name Caltech ?
7 WormBase Model:?Anatomy_term Caltech ?
8 WormBase Model:?Antibody Caltech ?
9 WormBase Model:?AO_code ? ?
10 WormBase Model:?Atlas Ocir WORMBASE ATLAS (VIRTUAL WORM)
11 WormBase Model:?Author Caltech ?
12 WormBase Model:?Balancer ? ?
13 WormBase Model:?CDS Sanger ? Paul Davis + others
14 WormBase Model:?Cell Sanger/Caltech? ?
15 WormBase Model:?Cell_group Sanger/Caltech? ?
16 WormBase Model:?Clone Sanger ?
17 WormBase Model:?Condition ? ?
18 WormBase Model:?Contig Sanger ?
19 WormBase Model:?Database Sanger ?
20 WormBase Model:?Database_field Sanger ?
21 WormBase Model:?Expression_cluster Caltech ?
22 WormBase Model:?Expr_pattern Caltech ?
23 WormBase Model:?Expr_profile Caltech ?
24 WormBase Model:?Feature Sanger ? Paul Davis Mary Anne
25 WormBase Model:?Feature_data Sanger ?Class of data used to mark up features on Transcript data
26 WormBase Model:?Gene Sanger Envelope for collecting/connecting data pertaining to a single gene
27 WormBase Model:?Gene_class Sanger Used for describing and grouping a family of genes
28 WormBase Model:?Gene_cluster Sanger Used to denote a cluster of genes of a specific type - not maintained?
29 WormBase Model:?Gene_name Sanger ?
30 WormBase Model:?Gene_regulation Caltech ?
31 WormBase Model:?Genetic_code Sanger Allows for alternate genetic codes for Mitocondria and selenocysteine.
32 WormBase Model:?GO_code Caltech ?
33 WormBase Model:?GO_term Caltech ?
34 WormBase Model:?Grid Sanger ?
35 WormBase Model:?Grid_data Sanger ?
36 WormBase Model:?Grid_row Sanger ?
37 WormBase Model:?Homol_data Sanger Used for storing alignment data
38 WormBase Model:?Homology_group Caltech ?
39 WormBase Model:?Interaction Caltech ?
40 WormBase Model:?Interval_col_conf ? ?
41 WormBase Model:?Jade Acedb? ?
42 WormBase Model:?Lab_Location Caltech ?
43 WormBase Model:?Laboratory Caltech ?
44 WormBase Model:?Library Sanger libraries used for sequencing of nematode ESTs // Information to come from Mark Blaxters
45 WormBase Model:?Life_stage Caltech ?
46 WormBase Model:?Locus Sanger This class is a reminent that should be cleaned up.
47 WormBase Model:?ManyMap Sanger ?
48 WormBase Model:?Map Sanger ?
49 WormBase Model:?Map_error Sanger ?
50 WormBase Model:?Map_offset Sanger ?
51 WormBase Model:?Map_position Sanger ?
52 WormBase Model:?Mass_spec_experiment Sanger ?
53 WormBase Model:?Mass_spec_peptide Sanger ?
54 WormBase Model:?Method ? AceDB class that details display etc. of objects in the other classes
55 WormBase Model:?Microarray Caltech ?
56 WormBase Model:?Microarray_experiment Caltech ?
57 WormBase Model:?Microarray_results Caltech ?
58 WormBase Model:?Mixed_grid_row Sanger ?
59 WormBase Model:?Molecule Caltech ?
60 WormBase Model:?Motif Sanger ?
61 WormBase Model:?Movie Caltech ?
62 WormBase Model:?Multi_counts Sanger? ?
63 WormBase Model:?MultiMap ? Not used?
64 WormBase Model:?Multi_pt_data Sanger ?
65 WormBase Model:?Neurodata ? ?Not Used
66 WormBase Model:?Neuro_location ? ? Not Used
67 WormBase Model:?Oligo ? ?
68 WormBase Model:?Oligo_set ? ?
69 WormBase Model:?Operon Sanger Stores genes that are in Operons Paul Davis
70 WormBase Model:?Paper Caltech ?
71 WormBase Model:?PCR_product ? ?
72 WormBase Model:?Person Caltech ?
73 WormBase Model:?Person_name Caltech ?
74 WormBase Model:?Phenotype Caltech ?
75 WormBase Model:?Phenotype_Assay Caltech ?
76 WormBase Model:?Phenotype_name Caltech ?
77 WormBase Model:?Picture Caltech ?
78 WormBase Model:?Position_Matrix Caltech ?
79 WormBase Model:?Pos_neg_data Sanger ?
80 WormBase Model:?Protein Sanger ?
81 WormBase Model:?Pseudogene Sanger Stores the Pseudogene models
82 WormBase Model:?Rearrangement Caltech ?
83 WormBase Model:?ReconCellInfo Ocir ?
84 WormBase Model:?Reconstruction Ocir ?
85 WormBase Model:?Reference Caltech ?
86 WormBase Model:?RNAi Caltech ?
87 WormBase Model:?SAGE_experiment Sanger ?
88 WormBase Model:?SAGE_tag Sanger ?
89 WormBase Model:?Sequence Sanger A broad class for storing genomic, Transcripts Sequence etc.
90 WormBase Model:?SK_map Caltech ?
91 WormBase Model:?SO_term Caltech ?
92 WormBase Model:?Species Sanger ?
93 WormBase Model:?Strain Sanger ?
94 WormBase Model:?Structure_data Ocir ?
95 WormBase Model:?Timepoint Ocir ?
96 WormBase Model:?Transcript Sanger Stores RNAgenes and the Full length Coding_transcripts
97 WormBase Model:?Transgene Caltech ?
98 WormBase Model:?Transposon Sanger Stores the Transposon span and S_child info Paul Davis
99 WormBase Model:?Transposon_family Sanger Used for grouping like ?Transposons Paul Davis
100 WormBase Model:?Variation Sanger ? Mary Ann
101 WormBase Model:?Variation_name Sanger ?
102 WormBase Model:?YH Caltech ?
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