Difference between revisions of "WormBase Model:Phenotype"
From WormBaseWiki
Jump to navigationJump to search (Created page with '__TOC__ WormBase Models == Curator Comments/Description == == Model == <pre> </pre> == Proposed Changes ==') |
|||
| Line 11: | Line 11: | ||
== Model == | == Model == | ||
<pre> | <pre> | ||
| + | /////////////////////////////////////////////// | ||
| + | // ?Phenotype class | ||
| + | /////////////////////////////////////////////// | ||
| + | |||
| + | ?Phenotype Description UNIQUE ?Text #Evidence | ||
| + | Name Primary_name UNIQUE ?Phenotype_name XREF Primary_name_for #Evidence | ||
| + | Synonym ?Phenotype_name XREF Synonym_for #Evidence | ||
| + | Short_name ?Phenotype_name XREF Short_name_for #Evidence | ||
| + | Assay UNIQUE ?Text #Evidence | ||
| + | Remark ?Text #Evidence | ||
| + | Related_phenotypes Specialisation_of ?Phenotype XREF Generalisation_of | ||
| + | Generalisation_of ?Phenotype XREF Specialisation_of | ||
| + | Dead Alternate_phenotype ?Phenotype | ||
| + | Attribute_of RNAi ?RNAi XREF Phenotype | ||
| + | Variation ?Variation XREF Phenotype | ||
| + | Transgene ?Transgene XREF Phenotype // Added by Carol | ||
| + | Anatomy_function ?Anatomy_function XREF Phenotype | ||
| + | Interaction ?Interaction | ||
| + | Rearrangement ?Rearrangement XREF Phenotype | ||
| + | Strain ?Strain XREF Phenotype | ||
| + | Not_in_RNAi ?RNAi XREF Phenotype_not_observed //added by Wen for Not observed phenotypes | ||
| + | Not_in_Variation ?Variation XREF Phenotype_not_observed //added by Wen for Not observed phenotypes | ||
| + | Not_in_Strain ?Strain XREF Phenotype_not_observed //added by Wen for Not observed phenotypes | ||
| + | Not_in_Transgene ?Transgene XREF Phenotype_not_observed //added by Wen for Not observed phenotypes | ||
| + | Not_in_Rearrangement ?Rearrangement XREF Phenotype_not_observed //added by Wen for Not observed phenotypes | ||
| + | Associated_with GO_term ?GO_term XREF Phenotype ?GO_code #Evidence // Tag Associated_with changed by Carol | ||
</pre> | </pre> | ||
== Proposed Changes == | == Proposed Changes == | ||
| + | |||
| + | ==Unused tags== | ||
| + | Alternate_phenotype | ||
| + | |||
| + | Rearrangement | ||
Latest revision as of 08:23, 5 October 2010
Curator Comments/Description
Model
///////////////////////////////////////////////
// ?Phenotype class
///////////////////////////////////////////////
?Phenotype Description UNIQUE ?Text #Evidence
Name Primary_name UNIQUE ?Phenotype_name XREF Primary_name_for #Evidence
Synonym ?Phenotype_name XREF Synonym_for #Evidence
Short_name ?Phenotype_name XREF Short_name_for #Evidence
Assay UNIQUE ?Text #Evidence
Remark ?Text #Evidence
Related_phenotypes Specialisation_of ?Phenotype XREF Generalisation_of
Generalisation_of ?Phenotype XREF Specialisation_of
Dead Alternate_phenotype ?Phenotype
Attribute_of RNAi ?RNAi XREF Phenotype
Variation ?Variation XREF Phenotype
Transgene ?Transgene XREF Phenotype // Added by Carol
Anatomy_function ?Anatomy_function XREF Phenotype
Interaction ?Interaction
Rearrangement ?Rearrangement XREF Phenotype
Strain ?Strain XREF Phenotype
Not_in_RNAi ?RNAi XREF Phenotype_not_observed //added by Wen for Not observed phenotypes
Not_in_Variation ?Variation XREF Phenotype_not_observed //added by Wen for Not observed phenotypes
Not_in_Strain ?Strain XREF Phenotype_not_observed //added by Wen for Not observed phenotypes
Not_in_Transgene ?Transgene XREF Phenotype_not_observed //added by Wen for Not observed phenotypes
Not_in_Rearrangement ?Rearrangement XREF Phenotype_not_observed //added by Wen for Not observed phenotypes
Associated_with GO_term ?GO_term XREF Phenotype ?GO_code #Evidence // Tag Associated_with changed by Carol
Proposed Changes
Unused tags
Alternate_phenotype
Rearrangement
