Difference between revisions of "WormBase Model:Operon"

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(Created page with '__TOC__ WormBase Models == Curator Comments/Description == == Model == <pre> </pre> == Proposed Changes ==')
 
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== Model ==
 
== Model ==
 
<pre>
 
<pre>
 +
//////////////////////////////////////////////
 +
//
 +
// ?Operon class - [010928 dl]
 +
//
 +
//////////////////////////////////////////////
  
 +
?Operon SMap S_parent UNIQUE Canonical_parent UNIQUE ?Sequence XREF Operon
 +
        Species UNIQUE ?Species
 +
        Contains_gene ?Gene XREF Contained_in_operon #Trans_splice_leader
 +
        Associated_feature ?Feature XREF Associated_with_operon #Evidence
 +
        Reference ?Paper XREF Operon
 +
        Description UNIQUE Text    #Evidence
 +
        Method UNIQUE ?Method
 +
        History    Merged_into      UNIQUE ?Operon XREF Acquires_merge #Evidence
 +
                  Acquires_merge  ?Operon XREF Merged_into #Evidence
 +
                  Split_from      UNIQUE ?Operon XREF Split_into #Evidence
 +
                  Split_into      ?Operon XREF Split_from #Evidence
 +
                  Deprecated      Text  #Evidence //pad - for operons no longer believed.
 +
        Remark Text #Evidence
 +
 +
#Trans_splice_leader SL1 #Evidence
 +
                    SL2 #Evidence
 +
                    Microarray #Evidence  // Handles Blumenthal microarray assignments
 +
                    Inferred #Evidence                       
 
</pre>
 
</pre>
  
 
== Proposed Changes ==
 
== Proposed Changes ==

Revision as of 09:23, 10 August 2010

WormBase Models

Curator Comments/Description

Model

//////////////////////////////////////////////
//
// ?Operon class - [010928 dl]
//
//////////////////////////////////////////////

?Operon SMap S_parent UNIQUE Canonical_parent UNIQUE ?Sequence XREF Operon
        Species UNIQUE ?Species
        Contains_gene ?Gene XREF Contained_in_operon #Trans_splice_leader
        Associated_feature ?Feature XREF Associated_with_operon #Evidence
        Reference ?Paper XREF Operon
        Description UNIQUE Text     #Evidence
        Method UNIQUE ?Method
        History    Merged_into      UNIQUE ?Operon XREF Acquires_merge #Evidence
                   Acquires_merge   ?Operon XREF Merged_into #Evidence
                   Split_from       UNIQUE ?Operon XREF Split_into #Evidence
                   Split_into       ?Operon XREF Split_from #Evidence
                   Deprecated       Text   #Evidence //pad - for operons no longer believed.
        Remark Text #Evidence

#Trans_splice_leader SL1 #Evidence
                     SL2 #Evidence
                     Microarray #Evidence   // Handles Blumenthal microarray assignments
                     Inferred #Evidence                        

Proposed Changes