Difference between revisions of "WormBase Model:Molecule"

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== Models==
 
== Models==
  
===WS251 (proposed)===
+
===WS252 (proposed)===
see [[Molecule#Changes_for_WS251 |  Molecule wiki]]
+
see [[Molecule#Changes_for_WS252 |  Molecule wiki]]
  
 
===WS235===
 
===WS235===
 
  Reference ?Paper XREF Molecule //Added ability to cite molecules used in a published study
 
  Reference ?Paper XREF Molecule //Added ability to cite molecules used in a published study
 
===WS228===
 
===WS228===
<pre style="white-space: pre-wrap;
+
  Regulate_expr_cluster ?Expression_cluster XREF Regulated_by_molecule //Added for molecule regulation of gene expression by Wen
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+
 
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Regulate_expr_cluster ?Expression_cluster XREF Regulated_by_molecule //Added for molecule regulation of gene expression
 
</pre>
 
===WS227===
 
Rearrangement  ?Rearrangement  ?Phenotype  #Evidence  //KY [110602 pad]
 
  
 +
===WS224===
 +
Interaction ?Interaction XREF Molecule_interactor      // Chris WS244
 
===WS217(original)===
 
===WS217(original)===
 
<pre>
 
<pre>
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==Unused tags==
 
==Unused tags==
  
WS219 is the 1st data release that included data
+
WS219 is the 1st release that included data

Revision as of 21:17, 23 September 2015

WormBase Models

Curator Comments/Description

Molecule wiki
postgres molecule tables

Models

WS252 (proposed)

see Molecule wiki

WS235

Reference ?Paper XREF Molecule //Added ability to cite molecules used in a published study

WS228

 Regulate_expr_cluster ?Expression_cluster XREF Regulated_by_molecule //Added for molecule regulation of gene expression by Wen


WS224

Interaction ?Interaction XREF Molecule_interactor       // Chris WS244

WS217(original)

//////////////////////////////////////////////////
//
// Molecule class Model - Proposed by Karen Yook WS217
// Connects to: #Phenotype_info
//              ?Gene_regulation 
//
//////////////////////////////////////////////////      

?Molecule  Name ?Text
           Public_name ?Text
           Synonym ?Text
           DB_info Database ?Database ?Database_field ?Accession_number
           Gene_regulation Gene_regulator ?Gene_regulation XREF Molecule_regulator
           Affects_phenotype_of     Variation ?Variation ?Phenotype #Evidence
                                    Strain    ?Strain    ?Phenotype #Evidence
                                    Transgene ?Transgene ?Phenotype #Evidence
                                    RNAi      ?RNAi      ?Phenotype #Evidence 
           Molecule_use  ?Text  #Evidence
           Remark ?Text #Evidence

Unused tags

WS219 is the 1st release that included data