Difference between revisions of "WormBase Model:Homology group"

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== Model ==
 
== Model ==
 
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<pre>
 
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== Proposed Changes ==
 
 
/////////////////////////////////////////////////////////////////////////////////
 
/////////////////////////////////////////////////////////////////////////////////
 
//
 
//
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                 Protein ?Protein XREF Homology_group
 
                 Protein ?Protein XREF Homology_group
 
                 Remark ?Text #Evidence
 
                 Remark ?Text #Evidence
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== Proposed Changes ==
  
 
== Unused tags==
 
== Unused tags==

Revision as of 13:42, 4 October 2010

WormBase Models

Curator Comments/Description

Model

/////////////////////////////////////////////////////////////////////////////////
//
// ?Homology_group class - krb 031120
// Class to handle clusters of orthologus genes (COG) and other related data
//
/////////////////////////////////////////////////////////////////////////////////


?Homology_group Evidence #Evidence
                Title ?Text
                DB_info Database ?Database ?Database_field ?Accession_number XREF Homology_group
                Group_type  UNIQUE COG  COG_type KOG
                                                 TWOG
                                                 FOG
                                                 LSE
                                        COG_code #COG_codes
                                   HOPS_group    // Sonnhammer
                                   RIO_group     // Eddy
                                   InParanoid_group
                                   OrthoMCL_group     //erich Nov06
                GO_term ?GO_term XREF Homology_group
                Protein ?Protein XREF Homology_group
                Remark ?Text #Evidence

Proposed Changes

Unused tags

Evidence DB_info Database Group_type HOPS_group

          RIO_group

GO_term Remark