Difference between revisions of "WormBase Model:GO term"
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== Model == | == Model == | ||
<pre> | <pre> | ||
+ | //////////////////////////////////////////////////////// | ||
+ | // | ||
+ | // ?GO_term class modified 19/09/01 dl | ||
+ | // | ||
+ | /////////////////////////////////////////////////////// | ||
+ | |||
+ | ?GO_term Name ?Text | ||
+ | Definition ?Text | ||
+ | Term ?Text | ||
+ | Type UNIQUE Biological_process | ||
+ | Cellular_component | ||
+ | Molecular_function | ||
+ | Child Instance ?GO_term XREF Instance_of | ||
+ | Component ?GO_term XREF Component_of | ||
+ | Parent Instance_of ?GO_term XREF Instance | ||
+ | Component_of ?GO_term XREF Component | ||
+ | Attributes_of Cell ?Cell XREF GO_term | ||
+ | Motif ?Motif XREF GO_term | ||
+ | Gene ?Gene XREF GO_term // will this replace CDS? [040203 krb] | ||
+ | CDS ?CDS XREF GO_term | ||
+ | Sequence ?Sequence XREF GO_term // Erich, [011210 krb] | ||
+ | Transcript ?Transcript XREF GO_term // [030411 krb] | ||
+ | Pseudogene ?Pseudogene XREF GO_term // [030801 krb] | ||
+ | Phenotype ?Phenotype XREF GO_term // Erich, [020128 dl] | ||
+ | Index Ancestor ?GO_term XREF Descendent // Lincoln [020709 [krb] | ||
+ | Descendent ?GO_term XREF Ancestor | ||
+ | Anatomy_term ?Anatomy_term XREF GO_term // added [031107 krb] | ||
+ | Homology_group ?Homology_group XREF GO_term // added [031120 krb] | ||
+ | Expr_pattern ?Expr_pattern XREF GO_term | ||
+ | Version UNIQUE Text UNIQUE Text // Lincoln, to store version number of GO | ||
+ | // only to be attached to three parent GO_terms [krb 031028] | ||
</pre> | </pre> | ||
== Proposed Changes == | == Proposed Changes == | ||
+ | ==Unused tags== | ||
+ | |||
+ | Name | ||
+ | |||
+ | Cell | ||
+ | |||
+ | Sequence | ||
+ | |||
+ | Transcript | ||
+ | |||
+ | Pseudogene | ||
+ | |||
+ | Homology_group | ||
+ | |||
+ | Expr_pattern | ||
+ | |||
+ | Version |
Latest revision as of 13:25, 4 October 2010
Curator Comments/Description
Model
//////////////////////////////////////////////////////// // // ?GO_term class modified 19/09/01 dl // /////////////////////////////////////////////////////// ?GO_term Name ?Text Definition ?Text Term ?Text Type UNIQUE Biological_process Cellular_component Molecular_function Child Instance ?GO_term XREF Instance_of Component ?GO_term XREF Component_of Parent Instance_of ?GO_term XREF Instance Component_of ?GO_term XREF Component Attributes_of Cell ?Cell XREF GO_term Motif ?Motif XREF GO_term Gene ?Gene XREF GO_term // will this replace CDS? [040203 krb] CDS ?CDS XREF GO_term Sequence ?Sequence XREF GO_term // Erich, [011210 krb] Transcript ?Transcript XREF GO_term // [030411 krb] Pseudogene ?Pseudogene XREF GO_term // [030801 krb] Phenotype ?Phenotype XREF GO_term // Erich, [020128 dl] Index Ancestor ?GO_term XREF Descendent // Lincoln [020709 [krb] Descendent ?GO_term XREF Ancestor Anatomy_term ?Anatomy_term XREF GO_term // added [031107 krb] Homology_group ?Homology_group XREF GO_term // added [031120 krb] Expr_pattern ?Expr_pattern XREF GO_term Version UNIQUE Text UNIQUE Text // Lincoln, to store version number of GO // only to be attached to three parent GO_terms [krb 031028]
Proposed Changes
Unused tags
Name
Cell
Sequence
Transcript
Pseudogene
Homology_group
Expr_pattern
Version