Difference between revisions of "WormBase Model:GO term"
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== Model == | == Model == | ||
<pre> | <pre> | ||
| + | //////////////////////////////////////////////////////// | ||
| + | // | ||
| + | // ?GO_term class modified 19/09/01 dl | ||
| + | // | ||
| + | /////////////////////////////////////////////////////// | ||
| + | |||
| + | ?GO_term Name ?Text | ||
| + | Definition ?Text | ||
| + | Term ?Text | ||
| + | Type UNIQUE Biological_process | ||
| + | Cellular_component | ||
| + | Molecular_function | ||
| + | Child Instance ?GO_term XREF Instance_of | ||
| + | Component ?GO_term XREF Component_of | ||
| + | Parent Instance_of ?GO_term XREF Instance | ||
| + | Component_of ?GO_term XREF Component | ||
| + | Attributes_of Cell ?Cell XREF GO_term | ||
| + | Motif ?Motif XREF GO_term | ||
| + | Gene ?Gene XREF GO_term // will this replace CDS? [040203 krb] | ||
| + | CDS ?CDS XREF GO_term | ||
| + | Sequence ?Sequence XREF GO_term // Erich, [011210 krb] | ||
| + | Transcript ?Transcript XREF GO_term // [030411 krb] | ||
| + | Pseudogene ?Pseudogene XREF GO_term // [030801 krb] | ||
| + | Phenotype ?Phenotype XREF GO_term // Erich, [020128 dl] | ||
| + | Index Ancestor ?GO_term XREF Descendent // Lincoln [020709 [krb] | ||
| + | Descendent ?GO_term XREF Ancestor | ||
| + | Anatomy_term ?Anatomy_term XREF GO_term // added [031107 krb] | ||
| + | Homology_group ?Homology_group XREF GO_term // added [031120 krb] | ||
| + | Expr_pattern ?Expr_pattern XREF GO_term | ||
| + | Version UNIQUE Text UNIQUE Text // Lincoln, to store version number of GO | ||
| + | // only to be attached to three parent GO_terms [krb 031028] | ||
</pre> | </pre> | ||
== Proposed Changes == | == Proposed Changes == | ||
| + | ==Unused tags== | ||
| + | |||
| + | Name | ||
| + | |||
| + | Cell | ||
| + | |||
| + | Sequence | ||
| + | |||
| + | Transcript | ||
| + | |||
| + | Pseudogene | ||
| + | |||
| + | Homology_group | ||
| + | |||
| + | Expr_pattern | ||
| + | |||
| + | Version | ||
Latest revision as of 13:25, 4 October 2010
Curator Comments/Description
Model
////////////////////////////////////////////////////////
//
// ?GO_term class modified 19/09/01 dl
//
///////////////////////////////////////////////////////
?GO_term Name ?Text
Definition ?Text
Term ?Text
Type UNIQUE Biological_process
Cellular_component
Molecular_function
Child Instance ?GO_term XREF Instance_of
Component ?GO_term XREF Component_of
Parent Instance_of ?GO_term XREF Instance
Component_of ?GO_term XREF Component
Attributes_of Cell ?Cell XREF GO_term
Motif ?Motif XREF GO_term
Gene ?Gene XREF GO_term // will this replace CDS? [040203 krb]
CDS ?CDS XREF GO_term
Sequence ?Sequence XREF GO_term // Erich, [011210 krb]
Transcript ?Transcript XREF GO_term // [030411 krb]
Pseudogene ?Pseudogene XREF GO_term // [030801 krb]
Phenotype ?Phenotype XREF GO_term // Erich, [020128 dl]
Index Ancestor ?GO_term XREF Descendent // Lincoln [020709 [krb]
Descendent ?GO_term XREF Ancestor
Anatomy_term ?Anatomy_term XREF GO_term // added [031107 krb]
Homology_group ?Homology_group XREF GO_term // added [031120 krb]
Expr_pattern ?Expr_pattern XREF GO_term
Version UNIQUE Text UNIQUE Text // Lincoln, to store version number of GO
// only to be attached to three parent GO_terms [krb 031028]
Proposed Changes
Unused tags
Name
Cell
Sequence
Transcript
Pseudogene
Homology_group
Expr_pattern
Version
