Difference between revisions of "WormBase Model:Expression cluster"

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== Model ==
 
== Model ==
 
<pre>
 
<pre>
 +
//////////////////////////////////
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//
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// ?Expression_cluster class
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// For microarray data clustering results.
 +
//
 +
//////////////////////////////////
 +
 +
?Expression_cluster  Description  ?Text // refers to Biological meaning of this cluster group
 +
                    Algorithm    Text  // refers to the algorithm that was used to get this clustering result.
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                    Reference    ?Paper XREF Expression_cluster
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                    Microarray_results ?Microarray_results  Text #Evidence  //refers to all experimental results included in the cluster.
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                    SAGE_tag ?SAGE_tag Text #Evidence
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                    Gene ?Gene XREF Expression_cluster #Evidence          //Igor: populated during build based on Microarray_results mapping
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                    Expr_pattern      ?Expr_pattern XREF Expression_cluster #Evidence //added by Wen originally for Localizome
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                    Remark ?Text #Evidence   
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                    Anatomy_term ?Anatomy_term XREF Expression_cluster #Evidence //Describes microarray experiments involving expression profiling in a particular tissue or cell Igor Dec 06
  
 
</pre>
 
</pre>

Revision as of 09:46, 4 October 2010

WormBase Models

Curator Comments/Description

Model

//////////////////////////////////
//
// ?Expression_cluster class
// For microarray data clustering results.
//
//////////////////////////////////

?Expression_cluster  Description  ?Text // refers to Biological meaning of this cluster group
                     Algorithm    Text  // refers to the algorithm that was used to get this clustering result.
                     Reference    ?Paper XREF Expression_cluster
                     Microarray_results ?Microarray_results  Text #Evidence  //refers to all experimental results included in the cluster.
                     SAGE_tag ?SAGE_tag Text #Evidence
                     Gene ?Gene XREF Expression_cluster #Evidence           //Igor: populated during build based on Microarray_results mapping
                     Expr_pattern       ?Expr_pattern XREF Expression_cluster #Evidence //added by Wen originally for Localizome
                     Remark ?Text #Evidence    
                     Anatomy_term ?Anatomy_term XREF Expression_cluster #Evidence //Describes microarray experiments involving expression profiling in a particular tissue or cell Igor Dec 06

Proposed Changes

unused tags

SAGE_tag

Expr_pattern