Difference between revisions of "WormBase Model:Cell group"

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(Created page with '__TOC__ WormBase Models == Curator Comments/Description == == Model == <pre> </pre> == Proposed Changes ==')
 
 
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== Model ==
 
== Model ==
 
<pre>
 
<pre>
 +
?Cell_group    Main_name ?Anatomy_name XREF Name_for_cell_group #Evidence
 +
                Other_name ?Anatomy_name XREF Synonym_for_cell_group #Evidence
 +
                Fate ?Text     
 +
                Remark  ?Text #Evidence
 +
                Contains        Cell ?Cell XREF Cell_group
 +
                                Nucleus ?Cell XREF Syncitial_cell // for syncitia like hyp7
 +
                                Sub_group ?Cell_group XREF Contained_in
 +
                Contained_in ?Cell_group XREF Sub_group
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                Type    UNIQUE  Tissue
 +
                                Organ
 +
                                Region
 +
                                Lineage //put in for Lilncoln some time ago
 +
                Expr_pattern ?Expr_pattern XREF Cell_group     
 +
                Life_stage ?Life_stage XREF Cell_group
 +
                Anatomy_term ?Anatomy_term XREF Cell_group
 +
                Reference ?Paper XREF Cell_group
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                Tree_Node ?TreeNode XREF Cell_group
 +
                Group_derivation Expression_experiment          //groups made by experimenters in their reports
 +
                                Top_down_modelling            // sylvia's anatomy modelling shown on dendrograms starting with whole animal and working downwards
 +
                                Bottom_up_modelling            // for Raymond in the future for cell upwards approach
  
 
</pre>
 
</pre>
  
 
== Proposed Changes ==
 
== Proposed Changes ==
 +
 +
=== unused tags ===
 +
 +
Tissue
 +
 +
Expr_pattern
 +
 +
Bottom_up_modelling

Latest revision as of 11:11, 10 August 2010

WormBase Models

Curator Comments/Description

Model

?Cell_group     Main_name ?Anatomy_name XREF Name_for_cell_group #Evidence
                Other_name ?Anatomy_name XREF Synonym_for_cell_group #Evidence
                Fate ?Text      
                Remark  ?Text #Evidence
                Contains        Cell ?Cell XREF Cell_group
                                Nucleus ?Cell XREF Syncitial_cell // for syncitia like hyp7
                                Sub_group ?Cell_group XREF Contained_in
                Contained_in ?Cell_group XREF Sub_group
                Type    UNIQUE  Tissue
                                Organ
                                Region
                                Lineage //put in for Lilncoln some time ago
                Expr_pattern ?Expr_pattern XREF Cell_group      
                Life_stage ?Life_stage XREF Cell_group
                Anatomy_term ?Anatomy_term XREF Cell_group
                Reference ?Paper XREF Cell_group
                Tree_Node ?TreeNode XREF Cell_group
                Group_derivation Expression_experiment          //groups made by experimenters in their reports
                                 Top_down_modelling             // sylvia's anatomy modelling shown on dendrograms starting with whole animal and working downwards
                                 Bottom_up_modelling            // for Raymond in the future for cell upwards approach

Proposed Changes

unused tags

Tissue

Expr_pattern

Bottom_up_modelling