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August 6th, 2020

Experimental conditions data flow into Alliance

  • Experimental conditions used in disease annotations as Inducers (used to recapitulate the disease condition) and Modifiers (either ameliorates, exacerbates, or has no effect, on the disease condition)
  • We use the WB Molecule CV for Inducers and Modifiers in disease annotation
  • Currently Exp conditions are free text (captured in remarks) in phenotype annotations, will probably need to formalize later on
  • So for data flow into Alliance:
    • In the short term we will load the Molecule CV into the Alliance (Ranjana and Michael P. will work on this)
    • In the near future, groups will switch to using common data model that works for all and common ontology/ontologies