WormBase-Caltech Weekly Calls

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Previous Years

2009 Meetings

2011 Meetings

2012 Meetings

2013 Meetings

2014 Meetings

2015 Meetings


2016 Meetings

January

February

March


April 7, 2016

Tissue-enrichment tool

  • Juancarlos and Raymond working on
  • How to best integrate this into WormBase?
  • Best to have all production code/material in one place, but could set up a proxy if it's already up and running
  • Considering we don't know yet how popular the tool will be, the proxy could be a sufficient first step
  • Could be a subdomain, e.g. tissueenrichement.wormbase.org, similar to the data submission forms
  • Is this adaptable for the other MODs/organisms? Will submit the paper first

Karen's talk at ZFIN

  • Talk went well
  • some interest with SVM
  • Having good discussions about data types and nomenclature
  • Have their own reagent mapping pipeline to their genome browser

Daniela starting on gene regulation curation

  • Daniela working with Xiaodong to learn the curation process
  • Xiaodong's last day, next Friday 16th